Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu5g02671 ATGATCGGAGAACTGCATCATGAGCTGGAACTGCACGTGCCGGCGACTGAGGCATGGGATCTGTTCGGTACCCTTCGAATAGGGCAATTGGTCGCTGAAGAACTTCCGCAGCTTTTTCAAAGTGTGGAGCTAACGGAAGGGGATGGAGGAGTTGGCACCGTCCTGAAATTAACTTTCGCGCCAGGTGTGGGTGGGCCGAAGGGGTACAAGGAGAAGTTCACGAAGATTGATAATGCGAATCGCGTAAAGGAAACAGAGGTGGTTGAAGGAGGGTACTTGGAATTAGGGTTCAGTCTATTTAGGGTTCGTTTTGAAGTGATAGAGAAAGGTGAAGAGTCAAGCATAATCAAATCTACCATCGAGTATGAATTGAACGAAGACAATGCTTCCAATGCTTCACTTGTCTCTATTCAGTCGCTGGCCACCATTGCTGAACTTGCCAAGAGTTACCTCAACAAGAACAACCCTTCCACTCATTGA 480 0.4771 MIGELHHELELHVPATEAWDLFGTLRIGQLVAEELPQLFQSVELTEGDGGVGTVLKLTFAPGVGGPKGYKEKFTKIDNANRVKETEVVEGGYLELGFSLFRVRFEVIEKGEESSIIKSTIEYELNEDNASNASLVSIQSLATIAELAKSYLNKNNPSTH 159
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu5g02671 159 PANTHER - 6 128 - -
Vimu5g02671 159 Pfam Pathogenesis-related protein Bet v 1 family 3 134 IPR000916 GO:0006952
Vimu5g02671 159 SMART Bet_v_1_2 1 154 IPR000916 GO:0006952
Vimu5g02671 159 FunFam S-norcoclaurine synthase 1 156 - -
Vimu5g02671 159 SUPERFAMILY Bet v1-like 4 153 - -
Vimu5g02671 159 CDD Bet_v1-like 3 128 - -
Vimu5g02671 159 Gene3D - 1 155 IPR023393 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu5g02671 Vimu-Chr5 36641751 36642352 Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu5g02671 - - gmx:100305838 260.766
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vimu5g02671 5 36641751 36642352 Vimu5g02671 5 36641751 36642352 ECH