Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu5g02664 ATGGCCGGAAAGTACATTCCACGATCGAAATCGCGAGCCACTCTGTTCCTCTTCCTTCTCGCTTTCTCTCTCCTCTTCATCCTCTTCTCTCTCTCTCCCCTCCGCTCTCCCTCCCTTTCTCCCACCAATGTCCTCGTTCCCGATGCCGAAACTTCCTTCCTCGTCTCCCTCGACCGTTTCCTCACCGCCACGCCGTCCTCCCTTTCCGACGACACCGCGCACGCCGGACAAGAGGACCTCGTCGCCAAGCTCGACGACGCCGTTTATCGATCCGAGATGGACAGGCTGTACACCGATCCTTACTACCCGCTCTCCCTTCCCCTTAGGGTTTACGTCTACGACATGCCCCCAAAGTTCACCTACGATTTGCTCTGGCTCTTCAAAAGGACCTACCGAGAAACCTCCAATCTCACCTCCAATGGAAGTCCCGTTCACCGTCTTATCGAACAGCACTCCATTGATTACTGGCTCTGGGCGGATCTCATCGCACCCCAATCGAAGAGGCTCTTGAACAGTGTCATCAGGGTTCACCGACAGGAGGAGGCTGATTTGTTTTACGTACCCTTCTTTACCACTATCAGCTTCTTCCTCATGGAAAAACAACAATGCAAGGCCCTTTATAGGGAAGCTTTGAAGTGGATCACTGATCAACCTGCATGGAAGCGCTCTGGTGGTAGAGATCACATAATCCCTGTGCATCATCCCTGGTCTTTTAAGTCTGTTCGAAAAGACGTGAAGAAAGCAATATGGTTGTTGCCTGATATGGATTCCACAGGGAACTGGTACAAGCCAGGACAGGTTTTTCTGGAGAAGGACCTGATTCTTCCATATGTTCCCAATCTTGATTTATGTGATGCCAAGTGTTTGGCTGAGACAAATCCTAAAAGAAATATTCTGCTTTTCTTTCGGGGCCGGCTCAAGAGAAATGCGGGAGGAAAGATACGCTCTAAACTTGTGGACGAATTACGTGGGGCTGATGGTGTGAGTATAGAGGAGGGAACAGCTGGGGAGGGGGGAAAAGAAGCTGCTCAAATTGGCATGCGCAAGTCTCTATTTTGCCTAAGCCCGGCTGGCGACACTCCATCCTCTGCTAGATTATTTGATGCTATTGTTAGTGGATGCATTCCAGTTATAATAAGTGATGAGCTGGAACTTCCTTTTGAAGGAATACTTGATTACAGGAAGATAGCATTGTTCATTTCCTCTAATGATGCCCTAAAGCCAGGTTGGCTTTTGAATTATTTGAAAGGCATCAGACCTGCTCGTATCAAAGAAATGCAACAAAATCTTGCTAAGTATTCAAGGCATTTCCTGTATTCTAGTCCAGCTCAGCCATTGGGTCCTGAAGACTTGGTTTGGAAAATGATGGCTGGGAAGTTGGTGAACATCAAGCTTCACACAAAAAGATCTCAACGTGTAGTGGAAGGATCTAGAAAACTGTGTACTTGTGATTGCAGGCCTGCCAATATTACTAAAACTGCTTCAATTATTTCTTGA 1497 0.4776 MAGKYIPRSKSRATLFLFLLAFSLLFILFSLSPLRSPSLSPTNVLVPDAETSFLVSLDRFLTATPSSLSDDTAHAGQEDLVAKLDDAVYRSEMDRLYTDPYYPLSLPLRVYVYDMPPKFTYDLLWLFKRTYRETSNLTSNGSPVHRLIEQHSIDYWLWADLIAPQSKRLLNSVIRVHRQEEADLFYVPFFTTISFFLMEKQQCKALYREALKWITDQPAWKRSGGRDHIIPVHHPWSFKSVRKDVKKAIWLLPDMDSTGNWYKPGQVFLEKDLILPYVPNLDLCDAKCLAETNPKRNILLFFRGRLKRNAGGKIRSKLVDELRGADGVSIEEGTAGEGGKEAAQIGMRKSLFCLSPAGDTPSSARLFDAIVSGCIPVIISDELELPFEGILDYRKIALFISSNDALKPGWLLNYLKGIRPARIKEMQQNLAKYSRHFLYSSPAQPLGPEDLVWKMMAGKLVNIKLHTKRSQRVVEGSRKLCTCDCRPANITKTASIIS 498
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu5g02664 498 Pfam Exostosin family 107 415 IPR040911 -
Vimu5g02664 498 PANTHER EXOSTOSIN HEPARAN SULFATE GLYCOSYLTRANSFERASE -RELATED 28 437 IPR004263 GO:0006486|GO:0016757
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu5g02664 Vimu-Chr5 36617066 36622168 Dispersed/Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu5g02664 - - ccaj:109799213 827.78