Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu5g02649 ATGCAAGAACTTAGAAAGGACTCTGAACCTGCGATTAATGGAGAAATGGGTGGCTCAAAGTTCTTTCCTTGGAATACAAATGCAATGGCTCTATCGTTTCCCCCTCAAACCTTTTCTCTTCCGTCTCCGATCCCTCAATGGCCTCAAGGACAAGGTTTTGCTTCCGGCCGTATAAATCTTGGTGAAATAGAAGTTTCCATGGTCACTAGGTTTGAGTTTATTTGGAGTAGCAGTGCTATGCAAGACACTAAAAATGCTGTTACATTCTATAGGCCTGTAGGAGTACCTGATAGTTTTCGTATTCTTGGTCACTATTGTCAATCCGATAACAAGCCTTTAAGGGGTTTTGTACTTGTTGCAAGGGAAGTGGAAACTGCTGATATTAACAATCAAGATAAGCTACCTCCTATGAAGAATCCCCTTGATTTTAGTTTGGTTTGGGGTGAAAATGGAAGAAGTTTGAAAACTTTAGGAGTATACTTTTGGGTACCTGAACCTCCTGCAGGTTACAAGGCCCTTGGATGTTTGGTTACTACCAAACCTGTGAAGCCTTTTTTGGATGAAATGTGCTGTGTTCGTACCGATCTCACCTATAGATGTGACCCTTATCGCCAATTACTCACTGCTGGCTCAAGCATTCCAGAGTTTTCATTTCAGGTGTGGAGTTTGAGACCTTGTGATCGTGGCATACTAGGGAAAGGAGTTTCTGTTGGGACTTTTTTCTGCAGCAATGGCTGGTGGACCATGAGAGAAGATGTACCTGTTGCATGCTTGAAGAATTTAAACCCTGCATTGCAAGCAATGCCAAATTTGCAACAAATACATGCACTTATTAAGCATTATGGCCCTACTATTTTCTTTCATCCTCAGGAAATTTACTTGCCATCTTCTGTGGAATGGTTTTTCAACAATGGAGCACTTTTGTACACAAAGGGTGTATCTGCAGGAGAGAAAATTGATGCAAATGGATCAAATCTACCAGGTGGGGGAACAAATGATGGTCAATATTGGATAGATTTGCCAAGAGATGATAAAAGGGAGCTTGTCAAACGTGGGAACTTGAAAAGTGCAAAGCTTTATGTTCATGTGAAGCCTGTTTTTGGAGGAACTTTTACTGACATTGCAATGTGGGTGTTTTGCCCTTTCAATGGACCAGCCACTCTGAAAATTGGAATCAAGGATATTCCTTTGAGCATGATTGGAGAGCATGTTGGTGATTGGGAGCATTTTACACTTCGCATAAGCAACTTCAGTGGAGAACTCTACAGTATATACTTCTCACAGCACAGTGGTGGTGAATGGGTGGATGCATGTGACTTAGAATATATTGAAGGTAATAAAGCTATTGTTTACTCATCAAAATCTGGACATGCAAGTTACCCTCATGCTGGTACCTGCATCCAAGGTTCTTCAAAACTTGGGATTGGCATTAGGAATGATGCTGCTCGCAGCAATTTGTATGTGGATTCTAGTATTCAGTATGAGCTTGTTGCAGCTGAGTATCTTGAAAATGAGATCACTGAACCTCAATGGTTGCAATTTAAGAGAGAATGGGGCCCCAAAATTGTTTATGATTCAAAAACTGAGCTGGATAAGGTAATCAATGCTCTTCCTCGGCTGCTCAAGTATTCTGTGAAGGGCTTGTTTAACAAGTTCCCAGTGGAACTTTATGGTGAGGAAGGTCCCACTGGGCCAAAAGAGAAAAATAATTGGTTACAGGATGAAAGATGGTGA 1734 0.4135 MQELRKDSEPAINGEMGGSKFFPWNTNAMALSFPPQTFSLPSPIPQWPQGQGFASGRINLGEIEVSMVTRFEFIWSSSAMQDTKNAVTFYRPVGVPDSFRILGHYCQSDNKPLRGFVLVAREVETADINNQDKLPPMKNPLDFSLVWGENGRSLKTLGVYFWVPEPPAGYKALGCLVTTKPVKPFLDEMCCVRTDLTYRCDPYRQLLTAGSSIPEFSFQVWSLRPCDRGILGKGVSVGTFFCSNGWWTMREDVPVACLKNLNPALQAMPNLQQIHALIKHYGPTIFFHPQEIYLPSSVEWFFNNGALLYTKGVSAGEKIDANGSNLPGGGTNDGQYWIDLPRDDKRELVKRGNLKSAKLYVHVKPVFGGTFTDIAMWVFCPFNGPATLKIGIKDIPLSMIGEHVGDWEHFTLRISNFSGELYSIYFSQHSGGEWVDACDLEYIEGNKAIVYSSKSGHASYPHAGTCIQGSSKLGIGIRNDAARSNLYVDSSIQYELVAAEYLENEITEPQWLQFKREWGPKIVYDSKTELDKVINALPRLLKYSVKGLFNKFPVELYGEEGPTGPKEKNNWLQDERW 577
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu5g02649 577 Pfam Vacuolar protein sorting-associated protein 62 35 575 IPR009291 -
Vimu5g02649 577 PANTHER BNAC01G40110D PROTEIN 19 577 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu5g02649 Vimu-Chr5 36511903 36514110 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu5g02649 - - gmx:100793026 890.952