Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu5g02630 ATGGCGATCGCTTTCTCCTTCTTCACTGCGCCCACTTCATCTTCATCTTCATCTTCATCTTCATTCTCTTCTTCCAAAGCCGTTCCTTCTCTTTCCCTTTCTTCCTCCCTCAGCATCCGCATCCCGCGCCGGGCGGATCGCTTTTTCCCTCTCCGCTCCACAATAGGAGCCTCTGTCGGCGGATCCTTCGGAGGGCACGGTGGCGGACATGGTGGTCATGGACATGGCGGTGGTGGCGGCGGCGGTGACGACGAGCACGGCAATGAGGGAAGGAACGAGGCCTTGATGGTCGTGGCGGAGGCGGGGAGGGCGTTGGAGAGCGTGCCGGCGGATTTGGCGGCGGCGATAAAGGAGGGAAAGATTCCGGCGGCGGTGGTGACGCGGTTTTTGGAGCTGGAGAAGTCCGCGTTCTTCCGGTGGCTGCTTCAGTTTCCTGGTTTCAGAGAGCGTCTCCTCGCCGATGATCTCTTCCTCGCGAAAGTCGCCATGGAATGCGGCGTTGGCGTCTTCACCAAGACTGCTGCTGAGTACGATCGAAGAAGAGAAAACTTTTTCAACGAGCTCGAAATCGTCTTCGCCGATGTGGTGATGGCCATCATTGCAGATTTCATGCTGGTATATCTTCCTGCGCCTACTGTTGCGCTTAGACCGCCACTCTCAGGCACTGCAGGGCCTATTGCTAAGTTTTTCCATGGCTGCCCAGATAATGCTTTTCAGGTTGCTCTGTCTGGGACATCATATTCATTGATACAGAGGATTGGTGCAATTGTGCGTAATGGGTCTAAGCTTTTTGCTGTTGGTACTGCTTCATCGCTGGTTAGTTCTTGTCTTCCCTGGAAATTTTTCCTAACTAAGGGGGCTCGTGATTTGGCAACTGAGTTGACTGATGCAGTCTTCTCATCTGCAAAACTTGACTGCTTGAGAAAGAGTTTAGTTGGTACTGCTATGACAAATGCCTTAATCAATGCAAAGAAAGCAGTTGAAAAATCTTCGGAAGGGGAAATTGAAAATGTTCCCATATTGTCTACCAGTGCTGCCTATGGTGTCTATATGTCTATTTCTAGCAACCTCAGGTATCAAGTAGTTGCTGGAATTATTGAACAGAGGCTTTTGGAACCTTTGCTGCATCAGCACAAGCTAATTCTTAGTGCACTGTGTTTCGCTGTGCGAACTGGCAACACGTATTTGGGTTCACTACTGTGGGTGGATTATGCTCGTTGGATAGGTGTTCAGTAG 1236 0.5089 MAIAFSFFTAPTSSSSSSSSSFSSSKAVPSLSLSSSLSIRIPRRADRFFPLRSTIGASVGGSFGGHGGGHGGHGHGGGGGGGDDEHGNEGRNEALMVVAEAGRALESVPADLAAAIKEGKIPAAVVTRFLELEKSAFFRWLLQFPGFRERLLADDLFLAKVAMECGVGVFTKTAAEYDRRRENFFNELEIVFADVVMAIIADFMLVYLPAPTVALRPPLSGTAGPIAKFFHGCPDNAFQVALSGTSYSLIQRIGAIVRNGSKLFAVGTASSLVSSCLPWKFFLTKGARDLATELTDAVFSSAKLDCLRKSLVGTAMTNALINAKKAVEKSSEGEIENVPILSTSAAYGVYMSISSNLRYQVVAGIIEQRLLEPLLHQHKLILSALCFAVRTGNTYLGSLLWVDYARWIGVQ 411
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu5g02630 411 PANTHER PROTEIN RETICULATA-RELATED 2, CHLOROPLASTIC-RELATED 14 274 - -
Vimu5g02630 411 MobiDBLite consensus disorder prediction 62 89 - -
Vimu5g02630 411 Pfam Protein RETICULATA-related 309 365 IPR021825 -
Vimu5g02630 411 Pfam Protein RETICULATA-related 149 277 IPR021825 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu5g02630 Vimu-Chr5 36410240 36412942 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu5g02630 - - gmx:100811998 501.516
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vimu5g02630 5 36410240 36412942 Vimu5g02630 5 36410240 36412942 ECH