Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu5g02599 ATGGTGAGAAAACATGGCTGGCAATTACCTGCTCACACTTTTCAGGTTGTTGCCATCACTGTATTTTGCTTGTTGGTGATTGCTTTCTATGCTTTTCTTGCTCCCTTCATTGGAGGTCGTATATGGGAATACATTTTCATTGGTGTTTACTCTCCTGTGGCACTCATTGTGTTCATTCTTTACGTCAGATGCACTGCAATCAACCCTGCAGATCCGGGCATTATGTCTAAGTTTGACCCCAGAGTGGGAAATAATTTCAACTCTGTTCATGAACTGTCAGGAAAACATCACATTTCGGAACATGAACGCATTGCTGCCAGAGAGCAATATTCTCCATCATCTTCCAAAAGGTCTATGACAAATATGAGCAAGAAAAGCTCGGTGGAAGATATGGACAGGGCAGACAGTTCAAGGAAACAGAATAACCAAAGCTCATGTAATGTAGTTGGAGGAATTTTCTGCATACTATTTTCACACGAAGATTGCCGAAAACAAGAAGCATCAACTGAGGAGCAGGGTGGTGGTGAGGATGCACTGTTCTGCACTTTGTGCAATGCTGAGGTGCGCAAGTTCAGCAAACATTGTAGAAGTTGTGATAAATGTGTTGATGGCTTCGATCACCATTGTCGGTGGCTTAACAATTGTGTGGGTCACAAAAATTACAGTTCTTTTATTGCTCTCATGGCTTTTAGTCTTGCTTGGCTAGCCATTGAAGCTGGAGTGGGTGTTGCGGTTTTTGTGCGTTTCTTTGTCAATAAGAGAGGAATGGAATCTGAAATCATTGATAGACTTGGAAATGGATTCTCTCGGCCCCCATTTGCTGCCGTTGTGGTCGTATGTACTGTAGTTTCTATCTTGGCTTGTGTGCCTTTGGGTGAGCTTTTCTTTTTCCACATGATACTAATCAGGAAGGGCATTACTACTTATGAATATGTTGTAGCAATGAGAGCCATGAGTGAAGCACCTGCAGGGGCATCTGTGGATGATGAATTGCCAAATATACTTTACTCTCCAACAGGCTCAGCCACGACTGGATTGAGTGGAGGAAGTTCTCTTGGTTTGCAATATAAAGGAGCTTGGTGCACCCCTCCCAGGGTATTTGTTGATTATCAGGATGAAGTTGTGCCTCACTTGGAGCCTGGAATGCTGCCGTCTACTGTTGATCCAGATGCAGCGGGTATTGCAGAAAGAGGGCAAAAGATGCCAAAAAGACCTGTTCGTATTAGTGCTTGGAAGCTTGCTAAGTTGGATTCACAAGAGGCTGTGAGAGCAGCTGCGAAAGCCAGGGCATCTTCTTCAGTTTTGCGACCTGTAGACAGCCACCGCCTACCAGATGCAGAATTGAGCTCTAGTGGCAACATGAGCATCAGAAGTAGTTTGAGCACTGAGACTGGAACTAACAAGGAAATTAAACACGAGTTAAGATTGTCTCCGGTCCAAAATTCTATTGCTCCTAGTCAAGGAAGTCGCGATGATTATGAGACTGGAACTCAAAGTATGAGTAGCTTCAGCAGTCCTAGCCATGTTCACGAGGCAGTTACACTCAGCCCTCTTCCACAGGGTCACAGTTTGGGTGGCTTCAGGTCAGGTGCCTCAATCCCTAGTTTGGTGGTGCCTGAACGTCCTTTAACTTCTAAAGCAACATTGTCAAACTTCAGGAACCCAATATCTAATCCGTCTATTGGATTTGATGGGAGGACAACAATGCCAAAAGGAATTGGCCATGATCCATTGTTGCTTTCTGCTTCTAACACTTCTATTCTAAGAGATGTGAAACGGTCATCAGTTGTTTGGGATCAAGAAGCTGGCAGATACGTTTCAGTCCCTTTATTGCCGTCAGAAGCCCGAAACAGATCATCCATGCGCGTAGAATTGCAAAATGTAAATGCTGAAACAAGCAGTTTTGGGAAAAAACCAGTGATTCCACAGCAAGAGTTGTCATCATCTGCACCCAAGTCTCCAGGACAGCACATACAGAATCTGATGTATACAGGAGATTCTATCTTTTATGGAGGTCCATTTTTGAGTGCCCCTGTTAAAGATGGTTTGAAAAATGAAAGACGTTTGGCATCAGGGGAGGCGCAAGATAACATATCAGCGAACTTGCCCCTAGAGCCAAGATATAAAAGGGACTCTCTTTCAAATCAGCTTCCTGTGTTTGTCCCTGGTGGATTTGAGAATAACCTTCAACCTCGTTCTGGCATGAATTAG 2211 0.4414 MVRKHGWQLPAHTFQVVAITVFCLLVIAFYAFLAPFIGGRIWEYIFIGVYSPVALIVFILYVRCTAINPADPGIMSKFDPRVGNNFNSVHELSGKHHISEHERIAAREQYSPSSSKRSMTNMSKKSSVEDMDRADSSRKQNNQSSCNVVGGIFCILFSHEDCRKQEASTEEQGGGEDALFCTLCNAEVRKFSKHCRSCDKCVDGFDHHCRWLNNCVGHKNYSSFIALMAFSLAWLAIEAGVGVAVFVRFFVNKRGMESEIIDRLGNGFSRPPFAAVVVVCTVVSILACVPLGELFFFHMILIRKGITTYEYVVAMRAMSEAPAGASVDDELPNILYSPTGSATTGLSGGSSLGLQYKGAWCTPPRVFVDYQDEVVPHLEPGMLPSTVDPDAAGIAERGQKMPKRPVRISAWKLAKLDSQEAVRAAAKARASSSVLRPVDSHRLPDAELSSSGNMSIRSSLSTETGTNKEIKHELRLSPVQNSIAPSQGSRDDYETGTQSMSSFSSPSHVHEAVTLSPLPQGHSLGGFRSGASIPSLVVPERPLTSKATLSNFRNPISNPSIGFDGRTTMPKGIGHDPLLLSASNTSILRDVKRSSVVWDQEAGRYVSVPLLPSEARNRSSMRVELQNVNAETSSFGKKPVIPQQELSSSAPKSPGQHIQNLMYTGDSIFYGGPFLSAPVKDGLKNERRLASGEAQDNISANLPLEPRYKRDSLSNQLPVFVPGGFENNLQPRSGMN 736
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu5g02599 736 MobiDBLite consensus disorder prediction 633 657 - -
Vimu5g02599 736 MobiDBLite consensus disorder prediction 479 505 - -
Vimu5g02599 736 MobiDBLite consensus disorder prediction 428 505 - -
Vimu5g02599 736 MobiDBLite consensus disorder prediction 107 143 - -
Vimu5g02599 736 MobiDBLite consensus disorder prediction 108 125 - -
Vimu5g02599 736 ProSiteProfiles DHHC domain profile. 179 229 - -
Vimu5g02599 736 PANTHER ZINC FINGER DHHC DOMAIN CONTAINING PROTEIN 22 315 - -
Vimu5g02599 736 Pfam DHHC palmitoyltransferase 178 313 IPR001594 GO:0016409
Vimu5g02599 736 MobiDBLite consensus disorder prediction 446 465 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu5g02599 Vimu-Chr5 36202987 36209301 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vimu5g02599 180 310 Lipid Metabolism Gene Families AT4G22750 28.244 3.24e-08 53.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu5g02599 K20027 - gmx:100805779 1298.11