Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu5g02587 ATGGGAGGAAGAATGCACACGAAATCGGACTCGGAGGTAACGAGCAACACCATGGAGCAATCGTCGCCGGCGCGTTCCCCTCCCCGGCGGCCGCTGTACTATGTTCAGAGCCCTTCCAACCACGACGTTGAGAAAATGTCCTACGGTTCAAGCCCCATGGGTTCCCCACACCACCATTTCCACTACTACCTCTCTTCCCCCATTCACCACTCTCGAGAATCCTCCACTTCTCGCTTCTCCGCCTCCCTCAAAAACCCTCGCAACTTTTCATCCAACTGGAAGAAACTCCACCCTCACCCCCAGCACGACGCCGATCCCGACGACGACGCCGATGACGGCGACGACCTCGACCGCTCCTCCCGCAACCTTCGCCTCTACTTCTGTTTCTTCCTCCTCTTTCTCATGCTTTTCACACTCTTCGCCGTCATCCTCTGGGGAGCCAGCAAGAGCTACAAGCCCAGAGTCACCGTCAAGGTAACATTTTTCGAGTTCACTCGCGGTAGTATTTGTTTTATGTGGGTAACGAAACCTAAGGAAATGTTGTGTTGTGGAGTGGAACAGAGCATGGTGTTCGAGAACTTGAATGTTCAGTCGGGGAACGACGGAAGTGGCGTACCAACTGATATGTTGTCGCTGAACTCAACGGTCAGAATTGTGTACAGAAATCCTGCGACTTTCTTCGGTGTTCACGTCACTTCGACGCCTCTTCAGCTTAGCTATTACCAGCTCGCAATAGGCTCTGGCCAGATGCGTAAGTTCTACCAGTCTAGAAAGAGTGAGAGAAAGTTGACAGTGGTGGTGTTCGGACACCAGATTCCTCTGTATGGTGGCGTGTCGGTTCTGGGAAACACTAAGGAGCATTTGGAGAGTGTTGCATTGCCGCTGAATCTGACGTTTACGGTGAGATCAAGGGCTTTCATCTTGGGAAGGTTAGTGAAGTCTAAATTCTATCGAAGAGTGAGATGTTCTGTGACATTGCATGGCAACAAACTTGGAAAACCTCTGAATTTAACCGATTCATGTGTCTACAAGTGA 1035 0.5101 MGGRMHTKSDSEVTSNTMEQSSPARSPPRRPLYYVQSPSNHDVEKMSYGSSPMGSPHHHFHYYLSSPIHHSRESSTSRFSASLKNPRNFSSNWKKLHPHPQHDADPDDDADDGDDLDRSSRNLRLYFCFFLLFLMLFTLFAVILWGASKSYKPRVTVKVTFFEFTRGSICFMWVTKPKEMLCCGVEQSMVFENLNVQSGNDGSGVPTDMLSLNSTVRIVYRNPATFFGVHVTSTPLQLSYYQLAIGSGQMRKFYQSRKSERKLTVVVFGHQIPLYGGVSVLGNTKEHLESVALPLNLTFTVRSRAFILGRLVKSKFYRRVRCSVTLHGNKLGKPLNLTDSCVYK 344
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu5g02587 344 MobiDBLite consensus disorder prediction 8 24 - -
Vimu5g02587 344 PANTHER LATE EMBRYOGENESIS ABUNDANT (LEA) HYDROXYPROLINE-RICH GLYCOPROTEIN FAMILY 119 329 - -
Vimu5g02587 344 MobiDBLite consensus disorder prediction 92 114 - -
Vimu5g02587 344 MobiDBLite consensus disorder prediction 1 51 - -
Vimu5g02587 344 Pfam Late embryogenesis abundant protein 220 323 IPR004864 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu5g02587 Vimu-Chr5 36092891 36094770 Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu5g02587 - - gsj:114379062 508.449
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vimu5g02587 5 36092891 36094770 Vimu5g02587 5 36092891 36094770 ECH