Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu5g02584 ATGAATAAGCCATCACAACTACGTGCTTTATCCTGTTTCTGTTCCATTCTGCTGCTTTTGGAATTCGTTTTCGTTGCTGCGGAAGACCCTTATAGATTCTTCGACTGGACTGTCACCTATGGTGACATTTATCCTCTGGGAGTTAAACAGCAGGGTATTTTGATCAATGGCCAATTCCCAGGCCCTGAAATCTACTCTGTTACCAATGACAATCTGATCATCAACGTACGCAATAACTTGACCGAGCCGAATGGTGTTCAACAAAGGAGAAATTCTTATCAAGATGGAGTTTATGGAACGACATGCCCCATCCCTCCAGGGCAGAACTTCACCTACACGCTTCAAGTCAAAGATCAGATTGGAAGTTTCTTCTATTTCCCATCTCTTGCTTTCCACAAGGCAGCTGGTGGTTTTGGAGCAATCAAAATCCTTAGCAGACCAAGAATCCCTGTCCCATTTCCTGAACCAGCTGCTGATTACAGTCTTCTTATTGGTGATTGGTACCAAATCAATCACAAGACACTTCAAGGTGTTCTAGATTTTGGACATAGACTTCCATTGCCTCAAGCTGTTCTTATCAACGGTCGTCCAAACGGCACAACATTCACAATCGAACAAGGGAAGACATACAGGCTTAGAATATCAAATGTTGGACTTGAAAACACTCTCAACTTCAGGATTGAAGGCCACAGCATGAAGTTGGTGGAAGTTGAGGGAACTCACACCATCCAAACCAAGTATTCCTCGTTAGATGTTCATGTGGGACAGTCTTATTCTGTGCTTATCACAGCTGATCAAGCTCCCAAGGATTACTACATTGCAGTGTCCACTCGTTTCACCGACAAAATCATCACAAGCACTGCCATCCTTCACTACAGTAACTCCCAACAATCTGTTTCTGGCACAATCCCTGGTGGCCCAACCGATCAGATCAATTGGTCCATCGAACAAGCTCGTTCGATCAGGACAAACTTGACAGCAAGTGGACCAAGGCCAAATCCTCAAGGCTCCTACCATTATGGTTTGATTAACATCAGTAGGACAATTACATTGTCGAGCTCAGCGGCACAAGTCAATAAGAAACAGAGATATGCAGTGAACAGTGTTTCGTTCGTACCAGCTGACACTCCTTTGAAGCTCGCCGATTACTTCAATATTGATGGGGTTTTCAAAGTTGGAAGCATTCCCGATACCCCTTCTCGTAAACCCATGTATCTTGACACCTCAGTCATGGGTGCCGATTTTCGAGCCTTCGTTGAGATCGTGTTTCAGAACAACGAGAACATTGTCCAGAGCTGGCACATTGACGGATACTCCTTCTGGGTTGTAGGAATGGATGGTGGTGTTTGGACACCTCAAAGTCGAAACGAGTACAACCTCATAGATGCAGTGTCAAGGAGCACAACACAGGTGTATCCCAAATCATGGACTGCAATTTACATAGCACTGGATAATGTGGGTATGTGGAATGTGAGGAGTGAATTTTGGGCAAGACGATACCTCGGACAACAATTTTATCTGCGAGTTTATTCACCAGTTGGATCCATCAGGGATGAATACCCAATTCCCAAAAATGCTCTTCTTTGTGGCAAAGCAGCAGGAAGAACAAGTAGATGA 1617 0.444 MNKPSQLRALSCFCSILLLLEFVFVAAEDPYRFFDWTVTYGDIYPLGVKQQGILINGQFPGPEIYSVTNDNLIINVRNNLTEPNGVQQRRNSYQDGVYGTTCPIPPGQNFTYTLQVKDQIGSFFYFPSLAFHKAAGGFGAIKILSRPRIPVPFPEPAADYSLLIGDWYQINHKTLQGVLDFGHRLPLPQAVLINGRPNGTTFTIEQGKTYRLRISNVGLENTLNFRIEGHSMKLVEVEGTHTIQTKYSSLDVHVGQSYSVLITADQAPKDYYIAVSTRFTDKIITSTAILHYSNSQQSVSGTIPGGPTDQINWSIEQARSIRTNLTASGPRPNPQGSYHYGLINISRTITLSSSAAQVNKKQRYAVNSVSFVPADTPLKLADYFNIDGVFKVGSIPDTPSRKPMYLDTSVMGADFRAFVEIVFQNNENIVQSWHIDGYSFWVVGMDGGVWTPQSRNEYNLIDAVSRSTTQVYPKSWTAIYIALDNVGMWNVRSEFWARRYLGQQFYLRVYSPVGSIRDEYPIPKNALLCGKAAGRTSR 538
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu5g02584 538 SUPERFAMILY Cupredoxins 153 332 IPR008972 -
Vimu5g02584 538 Gene3D - 157 330 IPR008972 -
Vimu5g02584 538 Gene3D - 23 144 IPR008972 -
Vimu5g02584 538 Pfam Multicopper oxidase 159 294 IPR001117 -
Vimu5g02584 538 Pfam Multicopper oxidase 376 511 IPR011706 GO:0005507|GO:0016491
Vimu5g02584 538 FunFam Monocopper oxidase-like protein 342 538 - -
Vimu5g02584 538 CDD CuRO_3_AAO_like_1 373 494 IPR034275 GO:0005507
Vimu5g02584 538 PANTHER MULTI-COPPER OXIDASE 50 505 IPR045087 -
Vimu5g02584 538 SUPERFAMILY Cupredoxins 24 173 IPR008972 -
Vimu5g02584 538 Pfam Multicopper oxidase 38 146 IPR011707 GO:0005507
Vimu5g02584 538 Gene3D - 341 536 IPR008972 -
Vimu5g02584 538 SUPERFAMILY Cupredoxins 342 531 IPR008972 -
Vimu5g02584 538 FunFam Monocopper oxidase-like protein 157 330 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu5g02584 Vimu-Chr5 36082927 36086180 Dispersed/Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu5g02584 - - gmx:100818914 1004.2
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vimu5g02584 5 36082927 36086180 Vimu5g02584 5 36082927 36086180 ECH