Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu5g02582 ATGGGGAGCGTTTCGTCTGAAGACGGTTCCGACCAACAGAGCGACCGCTGCGGCAGCTACAGCCTCAGCGCTGACGTCAGCGAGTCCGAGAGCTGCGGAAGCTTCTCCGCCCGCCGCTTCGACGCCGAGGGAGCTTCCAGCTCGGCCAACCTCTCGCCGCGTCCCGTCGCGTCTCACTTCAACTTCCCGCCTCCGCAGGACGTCGTTGTTTGGGATCACAAGCGCGACCTCGATCTGTCGGGTAATCCTCCTCTCTCTTCTTCGGGAAGTGAAAGAAAGCGAGAGTGTGGGTTATTGAGAGCGATTGGTTTTTTTGCAGAAGTGGAAATGATGAAGGAGCGGTTCGCTAAGCTGCTTCTCGGAGAAGACATGTCTGGTGGTGGAAAGGGGGTGTGCACTGCGCTTGCTATCTCCAATGCTATAACTAATCTCTCTGCAACTGTGTTTGGCGAACTGTGGAGGTTGGAGCCGCTGGCACTGCAGAAGAAGGCAATGTGGCGTAGGGAAATGGAGTGGCTGCTGTGTGTTAGTGATTCCATCGTGGAGCTGGTGCCATCTGTGCAGCAGTTTCCTGGGGGTGGAACCTACGAGGTGATGGCGACGCGTCCTCGCTCGGATTTGTACATCAATCTTCCGGCTCTGAAGAAGCTTGATGGGATGCTGCTCGGTATGCTTGATGGGTTTCATGACACGCAATTTTGGTATGTTGACCGGGGAATCATATTGGGTGATTCCAAGGATTGTGATGCCTACGGTAGACCATCGGTTAGGCAGGAGGAGAAATGGTGGCTTCCCTCTCCCAAGTTACCCCCAAATGGCTTGTCCGAGGAAAATAGGAAAAGGTTACAGCAATGCAGGGATTGCACTAATCAGATACTAAAAGCTGCTGTCGCAATTAATACTTCTGTGATTGCTGAAATGGAAATTCCCGGCGCATATGTAGAGTCCTTGCCCAAGAATGGCAAGGCTTGTCTGGGGGATATAATTTATCGATACATAACGGCAGACCAGTTCTCGCCTGAATGTCTCCTTGATTGTTTGGATCTTTCGTCAGAGCATCACACTCTGGATATAGCTAATAGAATTGAGGCTGCCATACATGTATGGAGGCTGAAGGACCATAAGAAACATCTAAGTTCAGCAAAAGCCAGACGGTCTTGGGGTGGAAAGGTGAAGGGACTTGTTGCTGACAGTGAAAAGAACAAGAATCATTTTCTTGCACAACGGGCAGAGACACTTCTGGAAAGCTTGAAAAACCGATTTCCAGGGCTCCCTCAGACTGCACTCGATATGGCCAAAATTCAATATAATAAGGATGTCGGACAGTCTATTCTTGAAAGTTATTCACGAGTGATGGAGAGCTTGGCCTTTAACATTATGGCCAGGATTGATGATGTCCTTTATGTAGATGATAGTATAAAGCGATGTGCGGCTGCAGATTCTCTCTCATTGTTCAGCAGGGGAGGTTTTGGTGGCATGCCCATCCAGAAGAGATTCTCTCCTAGTCCTTTCTCAATTCAGCACACTCCATACGCCTCCCCATTTGCAACACCAACGTTTTGTTCCTCCTCTCCTGTTACTGGGAGCCCGTGTAGTCCTGCAAGGATACATGACATGAAGAGAAATGCTCCTAAGGAGGGTGCAGATTCGAAGGCAGACAAGTTGGCCAAATCTGAGTTTGAGAGAGTTTGGTCATATGCCGGAAACCTCAGTGCAAGAAGAGCTTCCGGTGATGCTCCAGAAAGAGACTGA 1752 0.5006 MGSVSSEDGSDQQSDRCGSYSLSADVSESESCGSFSARRFDAEGASSSANLSPRPVASHFNFPPPQDVVVWDHKRDLDLSGNPPLSSSGSERKRECGLLRAIGFFAEVEMMKERFAKLLLGEDMSGGGKGVCTALAISNAITNLSATVFGELWRLEPLALQKKAMWRREMEWLLCVSDSIVELVPSVQQFPGGGTYEVMATRPRSDLYINLPALKKLDGMLLGMLDGFHDTQFWYVDRGIILGDSKDCDAYGRPSVRQEEKWWLPSPKLPPNGLSEENRKRLQQCRDCTNQILKAAVAINTSVIAEMEIPGAYVESLPKNGKACLGDIIYRYITADQFSPECLLDCLDLSSEHHTLDIANRIEAAIHVWRLKDHKKHLSSAKARRSWGGKVKGLVADSEKNKNHFLAQRAETLLESLKNRFPGLPQTALDMAKIQYNKDVGQSILESYSRVMESLAFNIMARIDDVLYVDDSIKRCAAADSLSLFSRGGFGGMPIQKRFSPSPFSIQHTPYASPFATPTFCSSSPVTGSPCSPARIHDMKRNAPKEGADSKADKLAKSEFERVWSYAGNLSARRASGDAPERD 583
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu5g02582 583 ProSiteProfiles PRONE domain profile. 98 480 IPR005512 GO:0005085
Vimu5g02582 583 FunFam Rop guanine nucleotide exchange factor 7 308 436 - -
Vimu5g02582 583 MobiDBLite consensus disorder prediction 531 553 - -
Vimu5g02582 583 FunFam Rop guanine nucleotide exchange factor 14 340 479 - -
Vimu5g02582 583 Gene3D PRONE domain, subdomain 1 340 480 - -
Vimu5g02582 583 MobiDBLite consensus disorder prediction 538 553 - -
Vimu5g02582 583 PANTHER ROP GUANINE NUCLEOTIDE EXCHANGE FACTOR 1 34 506 IPR038937 GO:0005085
Vimu5g02582 583 Pfam PRONE (Plant-specific Rop nucleotide exchanger) 107 474 IPR005512 GO:0005085
Vimu5g02582 583 Gene3D PRONE domain, subdomain 1 104 339 - -
Vimu5g02582 583 FunFam Rop guanine nucleotide exchange factor 1 102 339 - -
Vimu5g02582 583 MobiDBLite consensus disorder prediction 1 28 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu5g02582 Vimu-Chr5 36075930 36078830 Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu5g02582 - - gmx:100819455 1041.18