Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu5g02570 ATGCAACGACTACGTGCAACAGTAGAGTGCAAAGCAGCGAGTGGAGACTTTGAAAGGAGAGGGGTTGGTGAGCTTGACGAAAATGGAAACTTCAAAGTGTCCCTTCCACATGACATTGTGAAAGCTGATGAACTCAAAGAAGAATGCTATGTTCAGTTACTCAGTGCATCAGCTGCTCCTTGTCCTTCCCATGATGGCCCTTTTAGCACCAAAATTGTTATCAAGTCAAAAGGTGTCGACAAACACATACTTGGTCCTGCTGGAAAACTCAAGTTTTCTTCAGAGACATGCGCTTCTGCTTTCTTCTGGAAGCACCACCCTCTCATTCCTAAGCTTCCTCCTCATCCACCCATCACCATCCCTCCAATAGTATTTCCACCGTTTCCACCGAAGATTTTCCATAAACATCCTCCACCACCTGTGTATACTCCTCCGCCTGTATATACTCCTCCTCCTGTTGAACCTTCTCCTCCTCCTAAGCCTCCACCCAAGGAGCCTCCAAAACCACCACAACCATCCCCTCCAAAGGAGCCTCCTCATCCAAAACCACCAAAGCCTCATCCAAAACCACCAAAACCATGTCCCCCAAAGGAGCCTCCTCACCCAAAACCACCAAAGCCTCATCCAAAACCACCAAAACCATGTCCCCCAAAGGAGCCTCCTCATCCAAAACCACCAAAACCAAGTCCCCCAAAGGAGCCTCCTCATCCAAAACCACCAAAGCCATGCCCTCCAAAGGTTAAGCCTCCTCCTCTTCCACCAAAACCACCAAAGCCACCAAAGGTCAAGCCTCCTGTTCCACCACCCGTTAAGCCTCTCCCCCCACCGGTTCCAAAGAAGCCATGCCCACCAAAGCATCCACTTCTTCCTCCACTCAAGCCACTACCACCTCTTCCCAAAATTCCTCCAAAGCACTTTTTCCATCACCCCAAATGGCCTCCGGTTCCCCCATCTTCTTCTCAACCTTAG 969 0.4985 MQRLRATVECKAASGDFERRGVGELDENGNFKVSLPHDIVKADELKEECYVQLLSASAAPCPSHDGPFSTKIVIKSKGVDKHILGPAGKLKFSSETCASAFFWKHHPLIPKLPPHPPITIPPIVFPPFPPKIFHKHPPPPVYTPPPVYTPPPVEPSPPPKPPPKEPPKPPQPSPPKEPPHPKPPKPHPKPPKPCPPKEPPHPKPPKPHPKPPKPCPPKEPPHPKPPKPSPPKEPPHPKPPKPCPPKVKPPPLPPKPPKPPKVKPPVPPPVKPLPPPVPKKPCPPKHPLLPPLKPLPPLPKIPPKHFFHHPKWPPVPPSSSQP 322
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu5g02570 322 MobiDBLite consensus disorder prediction 232 322 - -
Vimu5g02570 322 PRINTS Small proline-rich protein signature 171 183 - -
Vimu5g02570 322 PRINTS Small proline-rich protein signature 252 261 - -
Vimu5g02570 322 PRINTS Small proline-rich protein signature 237 245 - -
Vimu5g02570 322 PRINTS Small proline-rich protein signature 209 215 - -
Vimu5g02570 322 PRINTS Small proline-rich protein signature 185 194 - -
Vimu5g02570 322 Pfam Pollen protein Ole e 1 like 2 62 - -
Vimu5g02570 322 MobiDBLite consensus disorder prediction 150 322 - -
Vimu5g02570 322 MobiDBLite consensus disorder prediction 191 205 - -
Vimu5g02570 322 PRINTS Proline rich extensin signature 151 167 - -
Vimu5g02570 322 PRINTS Proline rich extensin signature 110 122 - -
Vimu5g02570 322 PRINTS Proline rich extensin signature 171 188 - -
Vimu5g02570 322 PRINTS Proline rich extensin signature 128 149 - -
Vimu5g02570 322 MobiDBLite consensus disorder prediction 150 179 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu5g02570 Vimu-Chr5 36034827 36036574 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu5g02570 - - vum:124829568 202.986
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vimu5g02570 5 36034827 36036574 Vimu5g02570 5 36034827 36036574 ECH