Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu5g02567 ATGGAACTGACATGGTTGAGTGCCATTCTGGTGGGAGCTGGTTATCTTGCTTTGGGTTACTTCATTGGTTCTCAGTATCCTCCTCGTTTCATCTTCTCACGTAAATTATTGACCAAACACAACGATGCTACACTTTTCAACGATACCAACAATAAGAGAAATAGTAAGTCCAAACTCAAAGACCCCCTTCAGATTGAACAACTAGCTGACATTCTCGATGATTTTAAGATGATTCTCGTTGTCAGAAATGATCTTAAAATGGGTAAAGGGAAGATTGCTGCTCAGTGCAGTCATGCAACGTTGGGTCTCTATAAAAAGCTCCTTCATCGAGCACCAAAGGCGTTGAATAGGTGGGAGATGTCCGCACAGCCAAAGGTTGTTGTCAAAATTGAAAGTGAAGAAGATATGTTTGCTATGCAGGAAAGGGCTAAATCTCTGAAGTTACCCACCCATATCACAATTGATGCTGGGAGAACACAGATTGCACCAAGTGAGTATTTGAAAATTCCTCTAAGTAGTTTCTTATAG 528 0.4091 MELTWLSAILVGAGYLALGYFIGSQYPPRFIFSRKLLTKHNDATLFNDTNNKRNSKSKLKDPLQIEQLADILDDFKMILVVRNDLKMGKGKIAAQCSHATLGLYKKLLHRAPKALNRWEMSAQPKVVVKIESEEDMFAMQERAKSLKLPTHITIDAGRTQIAPSEYLKIPLSSFL 175
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu5g02567 175 CDD PTH2 75 163 IPR002833 GO:0004045
Vimu5g02567 175 FunFam Peptidyl-tRNA hydrolase 2, mitochondrial 73 170 - -
Vimu5g02567 175 NCBIfam aminoacyl-tRNA hydrolase 76 164 IPR002833 GO:0004045
Vimu5g02567 175 Gene3D Bit1 74 170 IPR023476 -
Vimu5g02567 175 Pfam Peptidyl-tRNA hydrolase PTH2 75 164 IPR002833 GO:0004045
Vimu5g02567 175 SUPERFAMILY Peptidyl-tRNA hydrolase II 73 164 IPR023476 -
Vimu5g02567 175 PANTHER PEPTIDYL-TRNA HYDROLASE 2 10 164 IPR002833 GO:0004045
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu5g02567 Vimu-Chr5 36002909 36004672 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu5g02567 K04794 - gmx:102664938 287.345