Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu5g02565 ATGACACGACCTTTTGGTGTGAAGGGGAAGAAGCGCAAGCACTCCCAATCCAAACAGGACTCAGAAGAAGAACACCAGCAGCCGCCACCGAAGAAAGCTGTCGCAGAAGAGAGCGAAGAATCACCACCAGAAGCAGAACCCGCACCAACAGAAGAGGATGAATTGAGCGGTATCCCAATTGCGCCCAGCGAGAAAGAAAGTACCAAATCCAATGTCATCTTCATTCTCGAAAAAGCTTCTCTTGAAGTCGCCAAAGTCGGCAAGACATATCAGTTGTTGAATTCCGATGACCATGCCAATTTCCTTCGCAAACACAACAAGAATCCTGGAGATTATAGGCCGGACATTACTCATCAATCTCTTCTATCTATTCTGGATAGTCCACTGAATAAAGCTGGAAGATTGCGGAATGTTTATATAAGAACGGAGAAAGGTGTTCTTATTGAGGTTAAGCCCTTTGTTCGAATTCCTAGAACATTCAAACGATTTGCTGGTGTTATGTTGGAACTGCTTCAAAAGCTCAGCATATCTGCTGTTGGCAAGCGTGAAAAACTCCTCCGAACAATTAAAAATCCTGTCACACAGTATTTGTCTGTCAACTCACGAAAAATAGGTCTATCATATAGTTCAGACAAGCTTGTAGATATGGATGACTATGTATCAAAGATTTCCAGCGATATGGATCTTGTTTTTGTGGTAGGAGCAATGGCCCATGGGAAGATTGAGACAGATTATACAGAAGATTACATAGCAATTTCTGGGTACCCTTTAAGTGCTGCTTATTGTATTACAAGGATTACTGGTGCCCTTGAGAGAAAGTGGAAGATTTTGTGA 834 0.4245 MTRPFGVKGKKRKHSQSKQDSEEEHQQPPPKKAVAEESEESPPEAEPAPTEEDELSGIPIAPSEKESTKSNVIFILEKASLEVAKVGKTYQLLNSDDHANFLRKHNKNPGDYRPDITHQSLLSILDSPLNKAGRLRNVYIRTEKGVLIEVKPFVRIPRTFKRFAGVMLELLQKLSISAVGKREKLLRTIKNPVTQYLSVNSRKIGLSYSSDKLVDMDDYVSKISSDMDLVFVVGAMAHGKIETDYTEDYIAISGYPLSAAYCITRITGALERKWKIL 277
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu5g02565 277 Pfam EMG1/NEP1 methyltransferase 74 271 IPR005304 GO:0070037|GO:0070475
Vimu5g02565 277 Gene3D - 72 277 IPR029026 -
Vimu5g02565 277 MobiDBLite consensus disorder prediction 1 63 - -
Vimu5g02565 277 CDD Nep1-like 72 271 IPR005304 GO:0070037|GO:0070475
Vimu5g02565 277 SUPERFAMILY alpha/beta knot 62 276 IPR029028 -
Vimu5g02565 277 FunFam Ribosomal RNA small subunit methyltransferase 72 277 - -
Vimu5g02565 277 PANTHER NEP1/MRA1 25 277 IPR005304 GO:0070037|GO:0070475
Vimu5g02565 277 MobiDBLite consensus disorder prediction 15 39 - -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu5g02565 K14568 - gmx:100778294 440.654