Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu5g02550 GGAGAAGCAGAGATGGAGAGTGTAAGAAGAAATGCAGAAGCTCTTGTGGAGAAGATGATGAAAGGGAACGATGCTTCCCATGACGCAGCTCATGTTTGGAGAGTTCGTGATCTTGCTCTCTCACTTGCCGAAGAGGAAGGCCTCTCTTCCGATCCTCACTCCATGCAAATCGTTGAGCTTGCTGCACTGCTCCATGACATAGCCGACTACAAATACCTTAGGGACCCATCTGAGGAAAAAATTGTTGAGAATTTTCTTGACCAAGAGGGAGTTGAGGAGGATAAGAAATTAACAATTTTGAGGATCATCAGAGAAATGGGTTTCAAGGAAGAGGTGACTGGAAATGGAAGTAGTGATTGCTTTCCAGAATTTGGAGTTGTGCAAGATGCTGATCGACTTGATGCTATTGGTGCTATAGGAATTGCACGTTGCTTCACTTTTGGCGGGAGTAAGAAGAGGTTGCTGCATGATCCCTCCATTCTGCCACGTTCTGATTTGTCCAAGGAGCAATACATGAACAAAGAGGAACAGACTACTATTAATCATTTTCATGAGAAGCTTCTCAAGCTCAAAGATATGATGAAAACCAAGGCTGGGAAAAGGAGGGCTGAAAGAAGGCATAAGTTCATGGAGGAGTTTGTGAAAGAGTTCTACGATGAATGGAATGGCCTAAACTGA 678 0.4395 GEAEMESVRRNAEALVEKMMKGNDASHDAAHVWRVRDLALSLAEEEGLSSDPHSMQIVELAALLHDIADYKYLRDPSEEKIVENFLDQEGVEEDKKLTILRIIREMGFKEEVTGNGSSDCFPEFGVVQDADRLDAIGAIGIARCFTFGGSKKRLLHDPSILPRSDLSKEQYMNKEEQTTINHFHEKLLKLKDMMKTKAGKRRAERRHKFMEEFVKEFYDEWNGLN 225
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu5g02550 225 SUPERFAMILY HD-domain/PDEase-like 10 223 - -
Vimu5g02550 225 Pfam HD domain 30 135 IPR006674 -
Vimu5g02550 225 Gene3D - 108 225 - -
Vimu5g02550 225 Gene3D - 4 105 - -
Vimu5g02550 225 SMART hd_13 24 145 IPR003607 -
Vimu5g02550 225 PANTHER SUPERFAMILY HYDROLASE, PUTATIVE (AFU_ORTHOLOGUE AFUA_1G03035)-RELATED 3 223 - -
Vimu5g02550 225 CDD HDc 27 140 IPR003607 -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu5g02550 K06950 - gmx:100500273 389.423