Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu5g02541 ATGGAGCAGAGGAAGAACAAACATGGGTTCAGGAAACCCTTTGTGATGAAAAAGCTTAAGCAACCGGAAGAGCAACCGACCGTGGATCCTATTACGGGAAAGAAAATCCCTAAAAGTTTTGTCTTTTCACGAGGGAAGATTCCGGCCTCTCTCAAACAGCTTCAGATGGACCTCAGAAAGTTGATGCTCCCATATACTGCTCTCAGCCTTAGGGAAAAGAAACGGAATAATTTGAGAGACTTTCTGAATGTTGCTGGACCCATGGGTGTCACGCATTTCTTTATATTGTCAAAAACTGCAAGTTCACCTTACTTGAGGGTTGCAACAACCCCTCAAGGGCCTACTCTTACGTTTAAGATACATGAATATTCATTGGCTGCTGACATTGCTCGATCTCAATTACATCCTAGATGCCCTAAGGATCTTTTCAAAAATTCTGCTTTGATTGTGCTTTCTGGATTTGTGAGAGGAGATTTACCTCTACAGCTTACAACTAACATGTTTCAGAATATTTTTCCGACAATTGATGTCAAAACTGTTAAGCTCTCCACTTGCCAAAGAATCTTGTTGCTTAATTATAACAAAGACACTAAGCTCATCGATTTTCGGCATTATTCCATAAGATTACAACCTGTAGGTGTCTCACGCAGATTAAGAAAACTTGTACAGACCCATCAGGTTCCTGATCTAAGGAATCTTCAAGACGTTAGTGATTTTGTCACAAAGGCTGGCTATGGATCCGAAAGTGAAGCTGATGAGGAAGCAGCAACAATTACTTTGTCTAGTGATCTTGGTAGAGTTAATCGTGCCTCTACCAAAAGTGCTGTCAAATTGCAAGAGGTTGGACCCAGGATGACTCTTCAACTAATTAAAATTGAGAAGGGACTGTGTACGGGTGAAGTTCTCTTCAGTGAATATGGTACCTCATCCTACACTTCGACCTCAAGACAAACTGGAGGCAAAGAAAAAAGTGATGATGAGATGGAAGGTGAAGAAGACGCAGAAGGCCACAAAGAAGGAGAACATGCAGAGGATAGTGAAGATGAAGACGAAGATGAAGAACTTCTTGATTAA 1074 0.4125 MEQRKNKHGFRKPFVMKKLKQPEEQPTVDPITGKKIPKSFVFSRGKIPASLKQLQMDLRKLMLPYTALSLREKKRNNLRDFLNVAGPMGVTHFFILSKTASSPYLRVATTPQGPTLTFKIHEYSLAADIARSQLHPRCPKDLFKNSALIVLSGFVRGDLPLQLTTNMFQNIFPTIDVKTVKLSTCQRILLLNYNKDTKLIDFRHYSIRLQPVGVSRRLRKLVQTHQVPDLRNLQDVSDFVTKAGYGSESEADEEAATITLSSDLGRVNRASTKSAVKLQEVGPRMTLQLIKIEKGLCTGEVLFSEYGTSSYTSTSRQTGGKEKSDDEMEGEEDAEGHKEGEHAEDSEDEDEDEELLD 357
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu5g02541 357 SMART Brix_2 40 292 IPR007109 GO:0006364|GO:0019843
Vimu5g02541 357 MobiDBLite consensus disorder prediction 1 30 - -
Vimu5g02541 357 Pfam Brix domain 47 291 IPR007109 GO:0006364|GO:0019843
Vimu5g02541 357 ProSiteProfiles Brix domain profile. 37 298 IPR007109 GO:0006364|GO:0019843
Vimu5g02541 357 PANTHER PETER PAN-RELATED 20 351 IPR045112 -
Vimu5g02541 357 MobiDBLite consensus disorder prediction 309 357 - -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu5g02541 K14859 - gmx:100800809 560.451