Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu5g02532 ATGTCAGATTGTTGGTTCCGTGTGAGTGTCCCTGTAAAGGGATTTAAGCAGTCATTTAGAGCCCCTTCTGCCATACTGCATACATTGAAGATGGCGACAACATCATTCTCTGGTTTGCAATTTGCAATGTCAAGATCATGCATTCCTTCATCACAGAAGATTGCAGATGCAAGTGCTGCGGTTCTTGGTGGCAAGTCCAAGATTGGATCATGGACTAAACTTGCAAGTGCAAGTAATGTTGCATCAGTGCTACCTTTCCAGCGGGGCTTCACTTCATCGTCCATAAAATCTGTCAAAAGTGTCACAAAGGCTACATCCGAGTCTAGTGCAGAAAGTGCTGTCTCAGGATTGCCAATTAATCTGAAAGGTAAAAGGGCTTTTATTGCTGGTGTTGCTGATGACAATGGATACGGATGGGCAATTGCAAAATCTCTTGCTGCAGCAGGAGCTGAAATTATCGTCGGCACGTGGGTTCCTGCTCTGAATATTTTTGAGTCCAGCCTACGGCGTGGAAAGTTTGATGGGTCTCGCGTATTACCAGATGGATCAATGATGGAGATTACCAAAGTTTATCCATTGGATGCAGTTTTTGACAATCTTGATGAAGTGCCAGAAGATATAAAAACAAACAAGCGATATGCAGGATCCAGTAAATGGACCGTTCAGGAAGTTGCTGACTCTGTTAAGGAAGACTTTGGCAGCATAGATATCCTCGTGCACTCACTTGCTAACGGACCAGAGGTGACAAAACCATTGTTGGAGACATCTCGGAATGGATATCTTGCGGCTATATCTGCATCTAGTTACTCCTATGTCTCTTTACTAAAGCATTTTCTTCCAATTTTGAACCCAGGTGGCTCTTCAATCTCTCTGACCTACATTGCTTCTGAAAGGATCATTCCTGGATATGGTGGTGGTATGAGTTCTGCAAAAGCTGCACTGGAGAGTGATACCCGAGTTCTTGCTTTTGAAGCAGGAAGAAAGCGCAAAATTAGAGTCAATACTATATCTGCTGGTCCACTGAGAAGTCGGGCTGCAAAGGCTATTGGATTCATTGATATGATGATTGATTATTCATTAGCCAATGCACCTCTACAGAAAGAACTATCGGCAGAGGAGGTGGGCAACACAGCTGCCTTCTTAGCATCACCTTTGGCATCTGCTATCACCGGTACTGTTCTATATGTTGACAATGGTCTGAATGCTATGGGTGTTGGAGTTGACAGTCCAATATTTAAAGATCTTGACATTCCCAAAGACCAGCATTAA 1269 0.4358 MSDCWFRVSVPVKGFKQSFRAPSAILHTLKMATTSFSGLQFAMSRSCIPSSQKIADASAAVLGGKSKIGSWTKLASASNVASVLPFQRGFTSSSIKSVKSVTKATSESSAESAVSGLPINLKGKRAFIAGVADDNGYGWAIAKSLAAAGAEIIVGTWVPALNIFESSLRRGKFDGSRVLPDGSMMEITKVYPLDAVFDNLDEVPEDIKTNKRYAGSSKWTVQEVADSVKEDFGSIDILVHSLANGPEVTKPLLETSRNGYLAAISASSYSYVSLLKHFLPILNPGGSSISLTYIASERIIPGYGGGMSSAKAALESDTRVLAFEAGRKRKIRVNTISAGPLRSRAAKAIGFIDMMIDYSLANAPLQKELSAEEVGNTAAFLASPLASAITGTVLYVDNGLNAMGVGVDSPIFKDLDIPKDQH 422
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu5g02532 422 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 122 404 IPR036291 -
Vimu5g02532 422 PRINTS Glucose/ribitol dehydrogenase family signature 307 326 IPR002347 -
Vimu5g02532 422 PRINTS Glucose/ribitol dehydrogenase family signature 58 75 IPR002347 -
Vimu5g02532 422 PRINTS Glucose/ribitol dehydrogenase family signature 364 384 IPR002347 -
Vimu5g02532 422 PRINTS Glucose/ribitol dehydrogenase family signature 329 346 IPR002347 -
Vimu5g02532 422 Gene3D - 124 350 - -
Vimu5g02532 422 PANTHER ENOYL-[ACYL-CARRIER-PROTEIN] REDUCTASE 31 414 IPR014358 GO:0004318|GO:0006633
Vimu5g02532 422 CDD ENR_SDR 123 404 IPR014358 GO:0004318|GO:0006633
Vimu5g02532 422 FunFam Enoyl-[acyl-carrier-protein] reductase [NADH] 352 407 - -
Vimu5g02532 422 Pfam Enoyl-(Acyl carrier protein) reductase 220 401 - -
Vimu5g02532 422 FunFam Enoyl-[acyl-carrier-protein] reductase [NADH] 124 350 - -
Vimu5g02532 422 Gene3D Enoyl acyl carrier protein reductase 351 408 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu5g02532 Vimu-Chr5 35805913 35814750 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vimu5g02532 31 416 Acyl Lipid Metabolism Gene Families AT2G05990 73.127 0.0 563
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu5g02532 K00208 - gmx:100777266 691.804
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vimu5g02532 5 35805913 35814750 Vimu5g02532 5 35805913 35814750 ECH