Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu5g02517 ATGGCAAATGCAGGAAATTTGGTATCGCAAAGGAGCTTCAATCCAATATTCAATCCACACCACTCCATAGATAAGCTCAACAACACCTTCAGGTTGTTCTCTCGGATTCCCTCTTACAATAATGCCACTGTCACTGTCACTGCTTCTTCCAAAAGAAAGGATGACTTTAACTCTCCTTTGATTGGGAAGAACACCAGCAGGGCTCCTCGCCGTTTGATCACAATATCACCTGGTGATGGCAGATATCACGGGGATTGGACAAGTGATTATCTAGTCTCTTTGCACGACCTAGACTTACAGGATTTGATTGAAGACGATGGTAATTCACATAAGAATGCACAAGTTTTCATCAATCTCTCCGTCCAAAAGCATGCTAGCTTTGGTTTATCCGTAGATGGAAGAGTCACCACATCCTTCACTAGAAAGTGCAGCAACTGTTCTACTCCCTATTGCCGACAGATTGAAGCAAAATTTAACGTATGGGTTCTTATAGCACCTAAAGACGACCGCAAGCAACCACAACTTGAAATTGGAGATGACCCTAATGTGATATATGTTAGACCTGGACACGAAGTTGATCTCGATTCTCTTGTACAAGATGCCATCCGACTAAACTCAGCAGACTGTTGCTCTGAATTATGCGAGAAAACTGAGGGTACAATACAGTATATAACTGGACAAAGTCAGGCTTCGGTTGATAAAAGGTGGTCTAGACTATTGGCACTAAAGAAAACAAATTTATGA 744 0.4194 MANAGNLVSQRSFNPIFNPHHSIDKLNNTFRLFSRIPSYNNATVTVTASSKRKDDFNSPLIGKNTSRAPRRLITISPGDGRYHGDWTSDYLVSLHDLDLQDLIEDDGNSHKNAQVFINLSVQKHASFGLSVDGRVTTSFTRKCSNCSTPYCRQIEAKFNVWVLIAPKDDRKQPQLEIGDDPNVIYVRPGHEVDLDSLVQDAIRLNSADCCSELCEKTEGTIQYITGQSQASVDKRWSRLLALKKTNL 247
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu5g02517 247 PANTHER LARGE RIBOSOMAL RNA SUBUNIT ACCUMULATION PROTEIN YCED HOMOLOG 2, CHLOROPLASTIC 1 246 IPR044985 -
Vimu5g02517 247 Pfam Large ribosomal RNA subunit accumulation protein YceD 131 243 IPR003772 -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu5g02517 - - gmx:100788798 392.504