Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu5g02511 ATGGCTTCCAGAACCCTAACGGACTTTTTCCAACCCGCTTCGAAGCGCTTGAAGTCCACGCTCCCACGATCCTGCAAATCAGATGACGCCAACGCCTCCACCCTCTCTGTCGACCAGAAGATGCGCGTGGAATACAACAAGCTCCTCGCCAAGTCCAAGCGGAATCTCAAACTCTGCGTCGAGAGGGTCTCCAAGACCAAAGGTCTAACTGGCGTGAAGCTGGAGGAGTTGCTGGTGGAGGAAACATGGTTGGACGCTATCCCTGGTGAACTTCAGAAACCTTATGCACTGACTCTCTCGAAGTTCGTGGAAAGTGAGATTTCAAGCGGCGACGACGTCGTATACCCTCCCACGCACTTGATTTTCAACGCTCTTAATTCTACCCCTTTTCATAGAGTCAAAGCTGTCATCCTTGGCCAGGACCCTTATCATGGACCTGGTCAAGCAATGGGGCTTTCATTCTCAGTTCCTGAGGGAATCAAAGTCCCTTCCAGTTTGGTAAATATATTCAAGGAGCTTCACCAAGACCTTGGTTGCACCATTCCACCCCATGGAAATCTTCAAAAATGGGCTGTGCAGGGTGTTCTCTTGCTCAATGCTGTTCTCACAGTCAGGAAGCATCAAGCAAATTCTCATGCCAAAAAAGGCTGGGAACAATTTACTGATGCTGTTATCAAGACAATCTCACAGAAGAGGGAGGGAGTTGTGTTTCTGTTGTGGGGAAATTCTGCTCGGGAGAAATCCAGGTTAATTGATGCAACAAAGCATCACGTTCTTACAGCTGCACATCCTTCTGGTTTGTCTGCAAACAGAGGCTTCTTTGGCTGCAGTGCAGTCACTAGGCGAGGGCTTTCATTAGTGTTTGATGTAAATAGATCTGATGCATGTTCTGTTCCACGGCTATGTGGAGCCATATTTTGGCACTTCTCTCGCACTAACCAACTTCTGGAGCAAATGGGCAGCGATCCCATAGATTGGCAGCTATAA 987 0.4843 MASRTLTDFFQPASKRLKSTLPRSCKSDDANASTLSVDQKMRVEYNKLLAKSKRNLKLCVERVSKTKGLTGVKLEELLVEETWLDAIPGELQKPYALTLSKFVESEISSGDDVVYPPTHLIFNALNSTPFHRVKAVILGQDPYHGPGQAMGLSFSVPEGIKVPSSLVNIFKELHQDLGCTIPPHGNLQKWAVQGVLLLNAVLTVRKHQANSHAKKGWEQFTDAVIKTISQKREGVVFLLWGNSAREKSRLIDATKHHVLTAAHPSGLSANRGFFGCSAVTRRGLSLVFDVNRSDACSVPRLCGAIFWHFSRTNQLLEQMGSDPIDWQL 328
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu5g02511 328 NCBIfam uracil-DNA glycosylase 81 278 IPR002043 GO:0004844|GO:0006281|GO:0006284
Vimu5g02511 328 FunFam Uracil-DNA glycosylase 73 290 - -
Vimu5g02511 328 SUPERFAMILY Uracil-DNA glycosylase-like 78 278 IPR036895 -
Vimu5g02511 328 PANTHER URACIL-DNA GLYCOSYLASE 20 278 IPR002043 GO:0004844|GO:0006281|GO:0006284
Vimu5g02511 328 SMART UDG_2 126 285 IPR005122 -
Vimu5g02511 328 Gene3D - 62 328 IPR036895 -
Vimu5g02511 328 CDD UDG-F1-like 95 326 IPR002043 GO:0004844|GO:0006281|GO:0006284
Vimu5g02511 328 Hamap Uracil-DNA glycosylase [ung]. 80 327 IPR002043 GO:0004844|GO:0006281|GO:0006284
Vimu5g02511 328 ProSitePatterns Uracil-DNA glycosylase signature. 134 143 IPR018085 GO:0006281|GO:0016799
Vimu5g02511 328 SMART UDG_2_a 126 285 - -
Vimu5g02511 328 Pfam Uracil DNA glycosylase superfamily 131 275 IPR005122 -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu5g02511 K03648 - gmx:100818241 540.806