Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu5g02497 ATGAATGATGAAGAAAAAACAGCGACAAGCAGAAGGCAACATGGTGCCAAAACGAAGGTTGTTGTGAGTGTGAAGTTTGAAGAAGGTGTGAAGGAAGATGGTTTATTAGAACAGATGATGCTGTCACGTTGCAATGAAGAGCTTCCCAGAAGTCTTGTCTTCTGGGTCACTCTTTATTTTTCTGGGATCTCCATTTCTGAGCTAAAGTCTGATTTTTTGGGGATTTTGATTGTGGGATTTCTGGTTGCTTGTTCTGGGGTGTCACCAAGTCGCCTTCATCAACTAAATATTGAACCTTCTCTGGGTATTTCGCCTCTGATTCCTGTTGGAGGGTACTCTGAATCGGTGAATTGGCGCTGTTGTTTTGGCTTGAAGATGGCTGTTGGTACTAGTTGTGGCTTAAGGATGGCGGCAGAGTCAAACGCTGGATTTCACAGTGAAGATATAGATTCTGTTTTTAACAGGCGGGCCATATCATTCCAGCCTGGTGGTGCTATTAACCGCCTGTCAGAGATGGTTCCAATGGGTAATTATTTTGGGCTAAGTAGTTCATCTGGGATGATATATTCTGGGAATTCAACCATCATTAACAGTAATCCTGTCATGAGTCAAGCCGGTAACCCATCAAGTTCTTCGCTTCTTCTCGATTCAGTTCCAGGACTGAAGCATGACACAGGTTTAGCTGTTGAGTGGTCTGTTGATGAGCAGTACAGATTGGAGGAAGGCCTTGCCAAATATGCTGATGAACCAAGTATCATGAGGTATATCAAAATTGCTGCCCTGTTGCCTGATAAAACTGTTCGAGATGTTGCTTTGAGGTGTAGATGGTTGACACAGTTCAAGCAATTGCAGGAAAATAAAGCTGATGGAACTTTCAATTTGGCCAAAATATGGTTGTTGTGGCTGCAATTGCCACTGGTGAGAAAGCGAAGGAAATCAGAAGAACACAATCTGGGAAAGAAGGTCCATAACAGAAAGGATAAGCCTGTGGAGTTAGCATCGAAGTCAAATTTACATTCGGCTCTGCCTCCAACCATGGCTACATTTTCACGCATGGCACACCATATGGACCAAAGTCAACGGATACAATATGATGGAATTTGTAGTCCTTTGAAGCAACTCATGGAGCAGAATGCTCAAGCTTTTAATCAAATCACTGCCAATTTGTCTACTTACAAGTATGAGAGGGATGCCTGGGATTATGAGCCAAATGCCACCACTGCCTGTCGCCATCAACGAGGATCTTGCTAG 1251 0.4349 MNDEEKTATSRRQHGAKTKVVVSVKFEEGVKEDGLLEQMMLSRCNEELPRSLVFWVTLYFSGISISELKSDFLGILIVGFLVACSGVSPSRLHQLNIEPSLGISPLIPVGGYSESVNWRCCFGLKMAVGTSCGLRMAAESNAGFHSEDIDSVFNRRAISFQPGGAINRLSEMVPMGNYFGLSSSSGMIYSGNSTIINSNPVMSQAGNPSSSSLLLDSVPGLKHDTGLAVEWSVDEQYRLEEGLAKYADEPSIMRYIKIAALLPDKTVRDVALRCRWLTQFKQLQENKADGTFNLAKIWLLWLQLPLVRKRRKSEEHNLGKKVHNRKDKPVELASKSNLHSALPPTMATFSRMAHHMDQSQRIQYDGICSPLKQLMEQNAQAFNQITANLSTYKYERDAWDYEPNATTACRHQRGSC 416
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu5g02497 416 PANTHER FINGER CCCH DOMAIN PROTEIN, PUTATIVE (DUF3755)-RELATED 192 395 - -
Vimu5g02497 416 MobiDBLite consensus disorder prediction 313 333 - -
Vimu5g02497 416 CDD SANT 230 275 IPR001005 -
Vimu5g02497 416 Gene3D - 229 278 - -
Vimu5g02497 416 MobiDBLite consensus disorder prediction 313 337 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu5g02497 Vimu-Chr5 35369131 35376886 Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu5g02497 - - gmx:100807371 410.223