Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu5g02491 ATGGATTATGAGGCTGATGGTTTTGGTGCCAATGGCGAGGGAGAGAGCAAGAGAGTGGGTGAAGGCGTTTCTGAGGAGATTTTGAAGAGTTTAGATGTAGAGGAGGATTTTCAGGAGGCAATGGAGCCACGGGACCAGGTTCGTGATCAAGGATCCGAACTCCGTTCGGAGGAGTCCGTAGTTGATAAACTGGATGATACCAACGCTGGTAATTCATTGACTTCAGCTTTGGTGGATGCACAAAGTCCAGATGTCGTTCAGGAGCCTGATTCCTCTAAGGAGGCCATTGGGGCTGATTCTGGGTGTGGGAAGCTGGGTGAAACTGATTTAATTGCTAATCAGGATTTGGAAAGGGATGGGCCGCCGGGAAATGATACTGTTCAGCTGGATGGCGTTGATTCTGGAGCGTCTGGAGATGAAGATTTTTTTGATGGTTCTAATGGTGTGGAGGAGGATAATTTGGAGCATAATGATGAGATAGGTGGAAAGGAAGAGTCTGGGTTAAATTCTGACGTAGAGGTGTCAGATAAGGAGAATGGTTTTGTGGTGGATGAAAACTCTGGTTTGACGAGTGATAAGGCTGAATTTGATGATGCTGATTTCAAAACTCCTAGAGCAAATGTTGGTACAACGTTGGATGATGTAAACACTGACAAGGAGGACGGTTTGGACACTGAAGTTAGTATCAAATCTGAATCCGGTGTGGTGATTCCAGCTGAAGGTACCGACGATGGGGATCTGAAGAAGTTTGACGCAGATCCTGAAATTGGAGATGGCAATACGGAGGTGAAGTTAAATGATTCAGCTGATTCTTCGGGTGAGATTCAAGATTATACATGTGAAGAAGTACATGCCACTTCAGCTGACACGACTTTAGAACAACAGGATGAAGTTACTAGGGATGTGAAGGATGCTACTCTGGGCACTGATATAAGCCATGAGGATAAAAATGAAGAAGAAACGAGTGCCCCTGGCATTCAGAATTCTGAACTAACTGGTTATGGAAATGGTGATACCGAAGATGAAAGCTCATCCTCTTTGGAAAATCCCTCAACTAAGGAGACATTGCCTATTCAGGAGGGTAGTGCAGCTGATCCAAACGAAGGAAGTAATAAGGATGATCAATCTCAGATTTCGGATGAAAATCATAGAGATGATGAGAACTCTTGTGTGGTTGAAGAGCCTGAAAGGATACAGGAGAAGATTATTAAAGAGACAGAAACCACACAAGAGACAGGAACCACACAAGAGACTGGAGAGCAACCTGTTCAACCTTCCTCAGATGTTTCTGAAAGGTCTGCTGATACTGGGCCTCCTCCTGTTCATCCTTCATCTGAAAATTCTGCTGGTGCTGGACCCACTCCTGTTCGTCCCGCTGGCCTTGGTCGTGCAGCTCCATTGCTGGAACCTGCATCTCGGGTGGTGCAGCAACCTCGTGCTAATGGTACTGTATCTAACGCTCAAGCCCAGCAAATGGAGGATTCCTCGAGTGGGGAGGCTGAGGAGTATGACGAGACACGGGAGAAACTTCAGATGATCAGGGTGAAGTTTTTACGGTTGGCTCATAGGCTTGGGCAAACTCCCCATAATGTTGTTGTAGCTCAAGTTTTATATAGATTAGGACTAGCTGAGCAACTAAGAGGAAGGAATGGGGGCCGTGTTGGTGCTTTTAGCTTTGATCGTGCAAGTGCAATGGCTGAGCAGCTTGAAGCTGCAGGTCAGGCGCCACTTGATTTCTCTTGTACAATTATGGTCCTTGGAAAGACTGGAGTTGGTAAAAGTGCTACCATCAATTCTATTTTTGACGAGGTTAAGTTTAATACCAGTGCTTTTAGTATGGGAACCAAGAAGGTTCAGGATGTCGTGGGAACAGTCCAGGGTATTAAGGTACGGGTCATCGATACACCTGGACTTCTACCTTCCTGGTCAGACCAGCGAAGCAACGAGAAGATCCTCCTCTCTGTTAAGAACTTCATTAAGAAAACTCCTCCTGATATTGTGTTGTATCTTGATAGGTTAGATATGCAAAGCAGGGATTTTAGTGACATGCCACTCTTACGCACAATTACGGAAATTTTTGGGCCATCCATTTGGTTCAATGCCATTGTGGTTCTGACTCATGCAGCATCTGCCCCTCCTGAAGGCCCCAATGGCACTGCTTCCAGTTACGACATGTTTGTTACTCAGCGTTCTCATGTCGTGCAGCAAGCCATTCGCCAAGCAGCAGGTGACATGCGTCTCATGAATCCTGTATCCTTGGTAGAGAACCATTCTGCTTGCCGAACAAACAGGGCTGGCCAGAGAGTATTGCCAAATGGCCAGGTTTGGAAGCCTCATTTGTTACTTCTATCTTTTGCCTCTAAAATTCTGGCCGAAGCAAATGCTCTTCTTAAGTTACAAGATAGTCCACCTGGAAAGCCTTATATAGCTCGAGCACGAGCGCCTCCATTACCTTTTCTTTTGTCAACCCTTCTCCAATCACGACCACAGTTAAAGTTGCCAGAGGAGCAGTTTGGTGATGAGGACAGTCTTGATGATGACCTTGATGAGGCATCAGAGTCTGATGATGAGAATGAACATGATGACCTGCCGCCATTTAAACCTTTAACAAAGGCTCAGGTGGAAAAGCTGTCTAAAGCTCATAAAAAAGCATATTTTGATGAGTTAGAGTATAGGGAAAAGCTTTTGATGAAGAAACAATTGAAGGAAGAAAGAAAGCGACGGAAATTGATGAAGAAAATGGCAGAAGCAGCAAAAGATCTACCTAGTGATTACAGTGAAAATGCGGACGAAGAAGGTGGTGGTGCAGCTTCTGTTCCTGTCCCGATGCCAGATTTGGCCCTTCCTGCATCTTTTGATTCTGATAACCCCACTCACCGGTATCGTTATCTTGATTCATCAAACCAGTGGCTTGTTAGACCTGTTCTAGAAACTCATGGATGGGATCATGATGTGGGTTATGAAGGCCTGAATGTAGAAAGATTGTTCGTTGTCAAGGACAGGATACCTTTGTCTTTCACGGGTCAGGTTACTAAAGATAAAAAGGATGCTAATGTTCAGATGGAAATAGCCGGCTCAGTTAAGCACGGGGAAGGGAAAGCAACTTCATTAGGATTTGATATGCAGACCGTGGGCAAGGACTTGGCTTATACATTACGCAGTGAGACAAGATTTACTAATTTTAGAAGAAATAAGGCAACCGCTGGTCTATCGTTTACTTTGCTTGGTGATGCCTTATCAGGTGGAGTTAAGATTGAAGACAAATTGGTTGCCAGTAAGCGGTTCAAGGTGGTTATCAGTGGTGGTGCAATGGCAGGGCGCAACGACATTGCATATGGTGGCAGTTTGGAGGCCCAGTTGAGAGATAAGGATTATCCTTTGGGTCGTTTCTTATCTACTCTCGGGCTCTCTGTTATGGATTGGCATGGGGATCTTGCTGTTGGGTGCAATGTGCAATCTCAAACCCCAGTTGGACGACATACAAACCTGGTTGCCAGGGCGAATCTGAACAATCGAGGGGCAGGACAAATAAGTATTCGATTAAACAGTTCAGAACAGCTTCAAATTGCTTTGGTTGCTCTCATTCCTCTCGTAAAGAAGCTAGTTGGTTATCCTCAACAATTGCAGTATGGGCAATATTAA 3642 0.4517 MDYEADGFGANGEGESKRVGEGVSEEILKSLDVEEDFQEAMEPRDQVRDQGSELRSEESVVDKLDDTNAGNSLTSALVDAQSPDVVQEPDSSKEAIGADSGCGKLGETDLIANQDLERDGPPGNDTVQLDGVDSGASGDEDFFDGSNGVEEDNLEHNDEIGGKEESGLNSDVEVSDKENGFVVDENSGLTSDKAEFDDADFKTPRANVGTTLDDVNTDKEDGLDTEVSIKSESGVVIPAEGTDDGDLKKFDADPEIGDGNTEVKLNDSADSSGEIQDYTCEEVHATSADTTLEQQDEVTRDVKDATLGTDISHEDKNEEETSAPGIQNSELTGYGNGDTEDESSSSLENPSTKETLPIQEGSAADPNEGSNKDDQSQISDENHRDDENSCVVEEPERIQEKIIKETETTQETGTTQETGEQPVQPSSDVSERSADTGPPPVHPSSENSAGAGPTPVRPAGLGRAAPLLEPASRVVQQPRANGTVSNAQAQQMEDSSSGEAEEYDETREKLQMIRVKFLRLAHRLGQTPHNVVVAQVLYRLGLAEQLRGRNGGRVGAFSFDRASAMAEQLEAAGQAPLDFSCTIMVLGKTGVGKSATINSIFDEVKFNTSAFSMGTKKVQDVVGTVQGIKVRVIDTPGLLPSWSDQRSNEKILLSVKNFIKKTPPDIVLYLDRLDMQSRDFSDMPLLRTITEIFGPSIWFNAIVVLTHAASAPPEGPNGTASSYDMFVTQRSHVVQQAIRQAAGDMRLMNPVSLVENHSACRTNRAGQRVLPNGQVWKPHLLLLSFASKILAEANALLKLQDSPPGKPYIARARAPPLPFLLSTLLQSRPQLKLPEEQFGDEDSLDDDLDEASESDDENEHDDLPPFKPLTKAQVEKLSKAHKKAYFDELEYREKLLMKKQLKEERKRRKLMKKMAEAAKDLPSDYSENADEEGGGAASVPVPMPDLALPASFDSDNPTHRYRYLDSSNQWLVRPVLETHGWDHDVGYEGLNVERLFVVKDRIPLSFTGQVTKDKKDANVQMEIAGSVKHGEGKATSLGFDMQTVGKDLAYTLRSETRFTNFRRNKATAGLSFTLLGDALSGGVKIEDKLVASKRFKVVISGGAMAGRNDIAYGGSLEAQLRDKDYPLGRFLSTLGLSVMDWHGDLAVGCNVQSQTPVGRHTNLVARANLNNRGAGQISIRLNSSEQLQIALVALIPLVKKLVGYPQQLQYGQY 1213
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu5g02491 1213 MobiDBLite consensus disorder prediction 374 407 - -
Vimu5g02491 1213 MobiDBLite consensus disorder prediction 834 868 - -
Vimu5g02491 1213 MobiDBLite consensus disorder prediction 839 859 - -
Vimu5g02491 1213 MobiDBLite consensus disorder prediction 203 223 - -
Vimu5g02491 1213 MobiDBLite consensus disorder prediction 65 88 - -
Vimu5g02491 1213 MobiDBLite consensus disorder prediction 18 64 - -
Vimu5g02491 1213 PANTHER GTPASE, IMAP FAMILY MEMBER-RELATED 580 1128 IPR045058 -
Vimu5g02491 1213 MobiDBLite consensus disorder prediction 149 175 - -
Vimu5g02491 1213 MobiDBLite consensus disorder prediction 921 942 - -
Vimu5g02491 1213 MobiDBLite consensus disorder prediction 322 373 - -
Vimu5g02491 1213 ProSiteProfiles AIG1-type G domain profile. 578 807 IPR006703 GO:0005525
Vimu5g02491 1213 MobiDBLite consensus disorder prediction 408 433 - -
Vimu5g02491 1213 MobiDBLite consensus disorder prediction 1 175 - -
Vimu5g02491 1213 FunFam Translocase of chloroplast 120, chloroplastic 553 800 - -
Vimu5g02491 1213 MobiDBLite consensus disorder prediction 294 321 - -
Vimu5g02491 1213 Gene3D - 550 798 IPR027417 -
Vimu5g02491 1213 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 575 715 IPR027417 -
Vimu5g02491 1213 CDD Toc34_like 553 798 - -
Vimu5g02491 1213 Pfam Translocase of chloroplast 159/132, membrane anchor domain 939 1202 IPR024283 -
Vimu5g02491 1213 NCBIfam chloroplast protein import component Toc86/159, G and M domains 457 1213 IPR005690 GO:0003924|GO:0005525|GO:0009707|GO:0045036
Vimu5g02491 1213 MobiDBLite consensus disorder prediction 237 505 - -
Vimu5g02491 1213 MobiDBLite consensus disorder prediction 242 260 - -
Vimu5g02491 1213 Pfam AIG1 family 581 714 IPR006703 GO:0005525
Vimu5g02491 1213 Coils Coil 901 921 - -
Vimu5g02491 1213 MobiDBLite consensus disorder prediction 476 496 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu5g02491 Vimu-Chr5 35326179 35331043 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu5g02491 - - gmx:100810931 1850.1