Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu5g02486 ATGGCCAATTATGTTCAAGAGGCAGCCAACAGGCTGAATGTGCTAATTATGCAGACACCCACGTTAACCACCAATTCAGCTGACAATGAAGGCATTAGAATGAGGGTGGTCAAGGAGACACTAGCCACAGAGAATGTTTCTGGTCCCAGTGAGTTGAAATTGGGGTTTGAGCATGGAATTTGGTGGAAGGGATTCTCGAGTCTACAAAGAGTTGGCCATGTGATAAAAGCAGCTTTCTTCGACTTGCAAAGCGACCACGCCCGTTTGGCTGCAATCATGCGGTTGTCTGCTATAAAACCATCAACTAAGCATGCTGTGCTAGATTCAACTTTGGCCAATGTAAAAACGTTCAGATTAAAGGGTCAAAATTTGAACCCTTTTGTGTTCTGTCCTGTATATATACCACCACCTCGACCCTCTTCTCCTTCCATCTTCTCTTCCATTTTCCAACCTCAACTCACCCCAGAAACCTACTTTTATTCTAAGTCTCAAACCCCATCACTGCAAACAACAAGTCACCACATCAAGGAGGTAGAGCCAGTCAATACAGTAAGAGTTTCAGACTTGAGAGAGTGGAAAGAAAGTGAAAGTGATCCGGAAGCCAAGAAAATGGCATCGGATAAGGTGGTGGAAACTGTAATAGCAGGGAACTACGTGGAAATGGAAACCGAAGGACACCCGAAGGACGTAAAATCAAGGTTGTCTAGCTTCTTGTGGCACGGTGGTTCTGTTTATGATGCTTGGTTCAGCTGTGCTTCCAACCAGGTGGCTCAAGTGCTGCTTACGCTGCCATACTCATTTTCCCAGCTGGGAATGCTTTCTGGCATTCTTTTTCAACTCTTCTACGGTTTACTTGGTAGCTGGACGGCTTACCTGATTAGCATACTCTACGTTGAATACAGAACAAGAAAAGAGAGAGAAAAAGTTAACTTCAGAAACCATGTCATCCAGTGGTTTGAAGTTCTTGACGGGCTCCTCGGGAAGCACTGGAGAAACGTGGGTTTGGCCTTTAACTGCACATTTCTTCTGTTTGGATCTGTCATACAACTGATAGCTTGTGCAAGAATCTGGTCCTTTTTGGGCCTCCTCATGACCACTTACACTGCTTGGTACCTCACAGTTGCCTCTCTCCTTCACGGTCAGATGGAAGGAGTTAAGCATTCGGGTCCGACCAGATTGGTTCTATATTTTACGGGGGCCACAAACATTCTCTACACATTCGGGGGACATGCTGTTACTGTGGAGATAATGCACGCGATGTGGAAACCTCAAAAGTTCAAGGCTATATATTTATTGGCAACCCTGTATGTGCTGACACTGACGCTTCCATCTGCAGCAGCAGTGTATTGGGCATTCGGAGACATGCTTCTAAATCACTCCAATGCTTTTGCTCTTCTTCCAAAATCACCCTTCCGTGACATGGCTTTTATAACATTCGGGTTTGCATGCACCCCATTGTACTTTGTTTGGGAGAAAGCAATAGGGATGCATGAGTGCAAGAGCTTATGCAAACGTGCTTTGGTGAGATTGCCAGTGGTGATCCCTATATGGTTTTTGGCCATCATCTTCCCCTTCTTTGGTCCCATCAACTCCACCGTTGGCTCTCTCCTTGTCAGCTTCACCGTTTACATCATCCCCGCCCTCGCCCACATCTTCACCTTCAAATCATCCTCTGCCAGACAGACAGAACCCGGGATTTTCTCGATAACCAATCACTTTTCTATATTCTTTATCGCCATTATTTTTGATGAACTATCTTCATATACTAAGAATGCGGTGGAACAACCTCCCAAGTTTGTTGGAAGATGGGTTGGAACCTTTATCATAAACTCATTCGTGGTGGTATGGGTGCTTGTGGTAGGATTTGGATTTGGTGGGTGGGCCAGCATGGTTAACTTCATACACCAGATCGACACGTTTGGACTCTTCACGAAGTGTTACCAATGCCCTCCACCGCTTCTTCCACCTATGCCGCCGCAGCAGCTCAATGCCACCGCGCCTTCGCCGCTTCACCACCCTCATCACGGCCACTGA 2034 0.4626 MANYVQEAANRLNVLIMQTPTLTTNSADNEGIRMRVVKETLATENVSGPSELKLGFEHGIWWKGFSSLQRVGHVIKAAFFDLQSDHARLAAIMRLSAIKPSTKHAVLDSTLANVKTFRLKGQNLNPFVFCPVYIPPPRPSSPSIFSSIFQPQLTPETYFYSKSQTPSLQTTSHHIKEVEPVNTVRVSDLREWKESESDPEAKKMASDKVVETVIAGNYVEMETEGHPKDVKSRLSSFLWHGGSVYDAWFSCASNQVAQVLLTLPYSFSQLGMLSGILFQLFYGLLGSWTAYLISILYVEYRTRKEREKVNFRNHVIQWFEVLDGLLGKHWRNVGLAFNCTFLLFGSVIQLIACARIWSFLGLLMTTYTAWYLTVASLLHGQMEGVKHSGPTRLVLYFTGATNILYTFGGHAVTVEIMHAMWKPQKFKAIYLLATLYVLTLTLPSAAAVYWAFGDMLLNHSNAFALLPKSPFRDMAFITFGFACTPLYFVWEKAIGMHECKSLCKRALVRLPVVIPIWFLAIIFPFFGPINSTVGSLLVSFTVYIIPALAHIFTFKSSSARQTEPGIFSITNHFSIFFIAIIFDELSSYTKNAVEQPPKFVGRWVGTFIINSFVVVWVLVVGFGFGGWASMVNFIHQIDTFGLFTKCYQCPPPLLPPMPPQQLNATAPSPLHHPHHGH 677
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu5g02486 677 PANTHER OS05G0424000 PROTEIN-RELATED 355 603 - -
Vimu5g02486 677 Pfam Transmembrane amino acid transporter protein 355 578 IPR013057 -
Vimu5g02486 677 Pfam Transmembrane amino acid transporter protein 240 354 IPR013057 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu5g02486 Vimu-Chr5 35278372 35284501 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vimu5g02486 206 649 Organic Solute Cotransporters AT2G21050 74.949 0.0 742
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu5g02486 K13946 - gmx:100812002 837.025