Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu5g02480 ATGTTGTGGTCTGCGGCAGTTATGGTTGAAGCTCAAGTTTATGTCATCAGTGGCACCATAGCTAATTGGTATTTCTCTAAGGATCATGAAACTCCTAAGCGGAGTATTCGAACTTCTCTCAGTAATTCTTTAGCTCTTACTGGTTGCTTTGAAAATTTCTTAGTTCAAGATTGCTCTTATCTGTTGTGTGTCTTCGAGCTTCTGAATATACATTATCGTGGTTCCCTCTGGTGTACTCCTAGATTGGCTGATAGGATTACTGATGGAAAGAAGTGTTCAACTGAAGACATTAACTGTGGGAATTTGGCTTGCAGAAATGCTTTTGGTCCTTCTTCTGGCACCATATGTTTGTCGGGGTTGCTTATCTTTGTTGTTCGAATGGTGCGTTCTGCGGTTGACAGTGCAAGACAAGAGGATATTCCCGGGATAGTGAACCTTGTTCTGCGGTGCTGTGTAAACGCCTTACTGACAGCAGTTGATTTTCTCAACAAGTTCACCATAAACTTTGCTGCAATAACTGGTGAAGCCTACTGCTCTTCTGCAAGGATGACATATGAACTACTGAGACGCAATCTTCTCTCTGCTGTTTTCGTGGAGACAATCTCATCTCGTATTCTGGCGGGAATCGTTTTTGTCTTTTCTGCAACATACACAATAGTGGTACGTGATGCTAATATGAAATTTGTATTACAAATGTGCTGTGATCTGTATGTTCTTACCATGGAATAA 729 0.4129 MLWSAAVMVEAQVYVISGTIANWYFSKDHETPKRSIRTSLSNSLALTGCFENFLVQDCSYLLCVFELLNIHYRGSLWCTPRLADRITDGKKCSTEDINCGNLACRNAFGPSSGTICLSGLLIFVVRMVRSAVDSARQEDIPGIVNLVLRCCVNALLTAVDFLNKFTINFAAITGEAYCSSARMTYELLRRNLLSAVFVETISSRILAGIVFVFSATYTIVVRDANMKFVLQMCCDLYVLTME 242
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu5g02480 242 Pfam Plasma-membrane choline transporter 1 220 IPR007603 GO:0022857|GO:0055085
Vimu5g02480 242 PANTHER CHOLINE TRANSPORTER-LIKE (SLC FAMILY 44) 1 219 IPR007603 GO:0022857|GO:0055085
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu5g02480 - - hbr:110672013 246.128