Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu5g02463 ATGGCTATTCAAACGCAGTGGTATCCCAATAATTCTGCTTCTCCGTTCTGGAACAATGGTCATTGTGCTCCTGGCTTTATAGATTCCGGTATCAGTTTTCAGCACAAGCATCAGCAACAGCTACCAGAACAGCATTTGGGAGAGTTATGCAATGGGAGTCAGGGAGGAGCCTTTGATCCAAATCTTCATGTCTGTAGTTCAAAAGGGATGAATTCTCCTGTGTTTGCTGTTCAGTTTCAGAAACAATGGGAAGAGATTGATCAGTATATGAAATCTGAGGATGAGAAATTGAGATATATGATAAAAGAGCACGGGAAACAACAGGTGATGGCATTGTTGAAAAAACTGGAAACTCGTACGCATCATGTTCTGAGGGAAAAAGATGTAGAAATTGCACAAGCCATGAAGAGAAGGTTAGAGTTAGAAGAGTATTTGAGAAAGTTAGAGGCCGAAAACAACAGATGGCAGAGGTTGGCTCAGGAGAAGGAAAACATGGCATTGTCTCTATACAAAACTCTGGAGGAAATGACAGAAGGTGGAAACTTTTTGAACAATGGGGCAGTGGCAAATGATGCAGTGTCGTGCTGTGGCGAAACTGGAGGAACAGAAGAGAGGGAAGAAGAAGAAGGAACTGCAGAAAAAGGTTTAGAATGTGGAGGGGTGAATGAAGTTGAACAGATTACGAGAAAAGGAGGAGTAATGCTTTGTAAAAGCTGCCATTCTAGGAGCTCGTGCTTTCTGTTCCTCCCATGCAGGCACCTTTCTTCCTGCAAAGTTTGCAACGCTTCCCTCGAGGCTTGCCCCGTCTGCAGAACACCAAAGAAGGCTACCATTGAGTTGAGACTTTGA 849 0.437 MAIQTQWYPNNSASPFWNNGHCAPGFIDSGISFQHKHQQQLPEQHLGELCNGSQGGAFDPNLHVCSSKGMNSPVFAVQFQKQWEEIDQYMKSEDEKLRYMIKEHGKQQVMALLKKLETRTHHVLREKDVEIAQAMKRRLELEEYLRKLEAENNRWQRLAQEKENMALSLYKTLEEMTEGGNFLNNGAVANDAVSCCGETGGTEEREEEEGTAEKGLECGGVNEVEQITRKGGVMLCKSCHSRSSCFLFLPCRHLSSCKVCNASLEACPVCRTPKKATIELRL 282
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
Vimu5g02463 282 Coils Coil 131 165 - -
Vimu5g02463 282 Pfam Zinc finger, C3HC4 type (RING finger) 235 275 - -
Vimu5g02463 282 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 202 280 IPR013083 -
Vimu5g02463 282 PIRSF SBP1_RNase_bind 28 282 IPR017066 -
Vimu5g02463 282 PANTHER SBP (S-RIBONUCLEASE BINDING PROTEIN) FAMILY PROTEIN 74 279 IPR017066 -
Vimu5g02463 282 ProSiteProfiles Zinc finger RING-type profile. 236 271 IPR001841 -
       

Functional genes information


Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vimu5g02463 235 272 Miscellaneous Gene Families AT2G21380 42.105 6.98e-06 45.4
       

Pathway information


Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu5g02463 K19042 - gmx:100789863 399.438