Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu5g02451 ATGGGTTTTCGTTTACCTGCCATCCGACGGGCATCATTTGCAGCAAGACAAACAACTTCAAAATCTGAAGATGTACCAAAGGGCTATTTTGCCGTTTATGTTGGAGAGAAACAAAATCGGTTTGTGATTCCCATCTCTTACTTGAACCAACCTTCATTCCAGGACTTACTGAGCCAAGCTGAGAAAGAGTTTGGATACGATCATCCCATGGGAGGCCTCACAATTCCTTGCAGGCAAGGCGAGGAGGGAGCAGAGATGTTAGTTTTTGGCAAGGGCAGAGGAGAAGCATCAATTTCTAGAACGAATTTCAAAGGCTTTTAA 321 0.4424 MGFRLPAIRRASFAARQTTSKSEDVPKGYFAVYVGEKQNRFVIPISYLNQPSFQDLLSQAEKEFGYDHPMGGLTIPCRQGEEGAEMLVFGKGRGEASISRTNFKGF 106
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu5g02451 106 PANTHER SAUR-LIKE AUXIN-RESPONSIVE PROTEIN FAMILY-RELATED 17 79 IPR003676 GO:0009733
Vimu5g02451 106 Pfam Auxin responsive protein 10 78 IPR003676 GO:0009733
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu5g02451 Vimu-Chr5 35058140 35058749 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vimu5g02451 24 78 Calmodulin-binding Proteins AT3G43120 56.364 7.86e-17 69.7
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu5g02451 - K14488 gmx:100816803 140.969