Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu5g02441 ATGTTCTATGTTGGATATCTTCTTATCTCCACTGATTCAGAGCTAGCTCAAGCCTCAACATTTACAGGTTGCTTATGTCACCCTGATATTAGTTGGTACATGATAGATTTCAGCTTTGCAGACGCATTTGGTTTCAAGTGGGAAATTCTGTTGGCCACTATATCAGAAGGTATAGTGATGTGGGGTTATGCCCTACCACTTATCCATGAAAGAGGTATTATCAGACAAGCATCATTTTCTACTGCAAAAACAACTCGCAAGGGACTTGACGTCCCAAAAGGCCACCTTGCAGTCTATGTTGGAGATAAGATGAGGCGGTTCATGATTCCTGTATCATATTTGAATCAATCTTCATTTCAACAATTGCTAAGTCAGTCAGAAGAAGAATTTGGATATGATCATCCAACTGGAGGTCTCACAATTCCATGCAAGGAGGACGAGTTCATAAACGTTATCTCTCATTTGAATTAG 471 0.3992 MFYVGYLLISTDSELAQASTFTGCLCHPDISWYMIDFSFADAFGFKWEILLATISEGIVMWGYALPLIHERGIIRQASFSTAKTTRKGLDVPKGHLAVYVGDKMRRFMIPVSYLNQSSFQQLLSQSEEEFGYDHPTGGLTIPCKEDEFINVISHLN 156
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu5g02441 156 PANTHER SAUR-LIKE AUXIN-RESPONSIVE PROTEIN FAMILY-RELATED 85 155 IPR003676 GO:0009733
Vimu5g02441 156 Pfam Auxin responsive protein 78 154 IPR003676 GO:0009733
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu5g02441 Vimu-Chr5 35007174 35008002 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vimu5g02441 66 148 Calmodulin-binding Proteins AT3G43120 45.977 1.33e-19 78.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu5g02441 - K14488 vum:124825808 157.147
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vimu5g02441 5 35007174 35008002 Vimu5g02441 5 35007174 35008002 ECH