Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu5g02393 ATGGCGGCAGTAGCAGCAGCATCCTCTCATCTAATGTTTGTTCTTCGTTTACAGCCATTGTCATCATCACCCTCTTCTGTCTTTTCTTTCCTCAAACCTCTTCTTGTTTCGTCTCCTAATAGAATATCTACACCCCTTCCACGTCTCCAATTTCCACCGCTTCGAAAATCTATCTTCTCTGTTTCCTCTTCTGTTGTGGTTTCCCAACACGGCGAGGAAACAGAGATTGGAGATGATGAATTGGATAGTGAAAGAGGTGATTTTGGAGATACCCAATTAGATTCAACGTCGTCGCCGTTGGTGAGAAAGAGGGAGGAGAGGCTGAAGTTGGAGGTGCCAAGTCTCAGTGTGAAAGAAAGGAAAGAGCTTGCGTCTTATGCTCACAGTTTGGGGGATAAGCTAAAGACCCAGTTGGTGGGAAAATCTGGTGTTACGTCCAATGTTGCCACTTCTTTCATTGAGACCCTTGAAGCCAATGAACTTCTCAAGATTAAAATACATAGGAGCTGTCCAGGTGAGTTAGATGATGTGGTGAAGCAGTTGGAAGAAGCAACTGGTTCGGTGGCTGTTGGTCAAATTGGTCGAACTCTGATCATATATAGGCCCAGTGCAACCAAACTGAAAGAGGAAGAAAAGAAGAAACAAGTTCGTAAGTTTATTCCGAAAAAGCAACTAAATTCAAGCCTGGTTAACAAGGTAAGAGTTGTGCCGTTATGTTATTTTGCATAA 729 0.4335 MAAVAAASSHLMFVLRLQPLSSSPSSVFSFLKPLLVSSPNRISTPLPRLQFPPLRKSIFSVSSSVVVSQHGEETEIGDDELDSERGDFGDTQLDSTSSPLVRKREERLKLEVPSLSVKERKELASYAHSLGDKLKTQLVGKSGVTSNVATSFIETLEANELLKIKIHRSCPGELDDVVKQLEEATGSVAVGQIGRTLIIYRPSATKLKEEEKKKQVRKFIPKKQLNSSLVNKVRVVPLCYFA 242
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu5g02393 242 SUPERFAMILY YhbY-like 115 204 IPR035920 -
Vimu5g02393 242 ProSiteProfiles CRM domain profile. 113 212 IPR001890 GO:0003723
Vimu5g02393 242 MobiDBLite consensus disorder prediction 70 97 - -
Vimu5g02393 242 SMART CRS1_YhbY_2 115 201 IPR001890 GO:0003723
Vimu5g02393 242 FunFam RNA-binding CRS1 / YhbY (CRM) domain protein 114 213 - -
Vimu5g02393 242 Pfam CRS1 / YhbY (CRM) domain 116 201 IPR001890 GO:0003723
Vimu5g02393 242 Gene3D - 114 219 IPR035920 -
Vimu5g02393 242 PANTHER CRS1/YHBY DOMAIN CONTAINING PROTEIN, EXPRESSED 1 228 - -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu5g02393 K07574 - gmx:100779359 308.531
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vimu5g02393 5 34668711 34670760 Vimu5g02393 5 34668711 34670760 ECH