Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu5g02391 ATGGTTTGCGCTAGTTCACTAATCCACCCAGCAAGCACCGTTTTAGTATCATTGCCATCAATCCAAAGGCAAAAACGTGGGAATGTGTTATGTAATAATAAGGTAAGGAAACAAAGAGTAGCATCAATGTCTGTTGGTAACCAGAAAAATCAGAATTCAGAAGTAGCAAGTGTAAGAGAAGGTGAAAGGCTCTATCTGGGGTTTGACTTTGGCACATCTGGTGCCAGGTTTGCCATAATCGACAAAGATGGAGCAATTCGAGCTGAGGCAAAGAGAGAGTACCCGTTGTTTGTGCAATTGTTGATTCTGAGGTTTCTGTTTGTCTTGTCTAGAAAGAATGGAGAGTCACGGGATTGGGTACGCTCATGGAAGGAGACACTGTTTTCTCTGCTTGAAGATGTCCCACTTGACATTCGCAAACACGTTGTGGCTATTTCAATTGACGGGACTTCTGCCACTACTCTCATTGTTGATAGTTACACAGGGGAACCGTTGTGGAGACCTTTTCTTTACAATGAGAGTTGTTCTGATGCATTACCAGTGGTGAAGTCTATTGCTCCTCCAAACCATACGGTTTGCACTGGATCGTCCACTCTGTGTAAACTTGTCTCTTGGTGGAACCATGTTGGTTCGGATAAAAAACCAGCTTTGTTGTTGCACCAAGCAGATTGGCTTTTGTGGCTTCTTCATGGAAAGCTTGGAGTTACAGATTATAATAATGCTCTCAAGGCATCATTTAATAAGTCTATCACCGTTGGCTATGATCCTGAAGTGGATTCGTATCCTTCATGGTTAGTGTGTCAACCATATTATCATCTTTTACCTTCAGTTCTTGCTCCCGGAACTCCAATTGCTTGTTTAAAGGAGGAAGTTGGAAATAAATATGGTTTTCAAAAGGACTGTGTTGTATGCACCGGAACCACAGACAGTATAGCTGCATTTCTTGCAGCTCGTGCTAGCCAACCTGGGAAAGCTGTTACTTCATTGGGTTCAACACTAGCTATTAAACTACTCAGCAATACAAGAATTGAAGATTCTCGGTTTGGAGTATACAGCCATCGCCTTGATGATAAATGGCTAGTTGGTGGTGCTTCAAACACTGGTGGAGCGATTCTTAGACAGCTCTTCACCGATAACCAATTAGAAAAACTGAGTGAACAGATCAATCCCTCACAACCTTCTCCTCTGGACTACTATCCCCTGCCCAAAGCAGGTGAAAGATTCCCAGTAGCAGATCCAAATTTGGCTCCAAGGCTTCATCCACGTCCTGAAAACGATGTTGAATACCTGCATGGGATTTTAGAGTCCATTGCGCGTATAGAGGCAAAGGCATATGAGTTGCTAAAGGAGCTAGGAGCAACCCAGGTAGAGGAAGTTTTCACTGCTGGTGGAGGAGCCAAAAATGAGAAGTGGATAAAGATTCGTGAGAGGGTGCTTGGTTTGCCTGTGAGTCGTGCAAATCAAACAGAAGCTGCATATGGAGCTGCATTATTGGCAAAAAAGGCTGATCAACAAAATATTCCTTCATAA 1530 0.432 MVCASSLIHPASTVLVSLPSIQRQKRGNVLCNNKVRKQRVASMSVGNQKNQNSEVASVREGERLYLGFDFGTSGARFAIIDKDGAIRAEAKREYPLFVQLLILRFLFVLSRKNGESRDWVRSWKETLFSLLEDVPLDIRKHVVAISIDGTSATTLIVDSYTGEPLWRPFLYNESCSDALPVVKSIAPPNHTVCTGSSTLCKLVSWWNHVGSDKKPALLLHQADWLLWLLHGKLGVTDYNNALKASFNKSITVGYDPEVDSYPSWLVCQPYYHLLPSVLAPGTPIACLKEEVGNKYGFQKDCVVCTGTTDSIAAFLAARASQPGKAVTSLGSTLAIKLLSNTRIEDSRFGVYSHRLDDKWLVGGASNTGGAILRQLFTDNQLEKLSEQINPSQPSPLDYYPLPKAGERFPVADPNLAPRLHPRPENDVEYLHGILESIARIEAKAYELLKELGATQVEEVFTAGGGAKNEKWIKIRERVLGLPVSRANQTEAAYGAALLAKKADQQNIPS 509
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu5g02391 509 FunFam D-ribulose kinase isoform X1 313 506 - -
Vimu5g02391 509 SUPERFAMILY Actin-like ATPase domain 64 314 IPR043129 -
Vimu5g02391 509 Gene3D - 313 506 - -
Vimu5g02391 509 SUPERFAMILY Actin-like ATPase domain 321 502 IPR043129 -
Vimu5g02391 509 Pfam FGGY family of carbohydrate kinases, N-terminal domain 64 315 IPR018484 GO:0005975|GO:0016301
Vimu5g02391 509 Pfam FGGY family of carbohydrate kinases, C-terminal domain 353 500 IPR018485 GO:0005975|GO:0016301
Vimu5g02391 509 FunFam D-ribulose kinase 61 312 - -
Vimu5g02391 509 PIRSF GlpK 62 506 IPR000577 GO:0005975|GO:0016301
Vimu5g02391 509 Gene3D - 61 312 - -
Vimu5g02391 509 PANTHER SUGAR KINASE 64 503 - -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu5g02391 K22935 - gmx:100779892 800.431
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vimu5g02391 5 34653363 34656849 Vimu5g02391 5 34653363 34656849 ECH