Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu5g02377 ATGGTTCAAAGAATAATTCTTGGAAACTCGAAGCCATCTTCCTCTCAGCACCAAGATGGCAGAACCAGAAAAACTGAAGTTATGAAGAAAATGACGAAGTCAAGGTCCTTTCATCTTTCTGATTTTGAGTTTTCTCATTCATCGTCTTCTTCGGTAAGGAGCTTATCTCAACCGAGAAAGTCACCCAATTACATGAAGCCCACCAGCAGTTCAGAAGCAAAGAAAGAGCTTTTCTCGGTTAGTCATCGACATACTCAATCTAGTTCAGATGGTAAGAGTGTACCACAAAAGGGTATGAGAAATTCAAAAGCTAGCTTCGTTTCTTGCAAAGAACCTGCAAAAAGTTTGTCTAGATCGTGTAGTTTGAATTCAATGAGAACATTAACAAAGAGTCCTAGTTTTAAGCCTTGCAAAGCTTGTTCAAAAAAACTCACATCAGCAGTTCTGTTCGAAGACGTGAATGCACCAGAGAGAGCCACCTGCTCTTCAACTTTGAAAGAGTATAACTTCCCCGAGTACCTCACGCTTCACCCTGGAGGAACTGAGTCTGAGGGAGTTTCAGTCATGAAGGTTTGCCCCTATACATACTGTTCTCTTAATGGCCATGGCCATGCTCCTTTGCCTCCATTGAAGAGCTTCATGTCAGAAAGGAGGCATCTTTTGGAGACTCGGAAGAAGGATACGAAGCTGGAAGTTGTGATCCCTCAAAGATGGAAGGTGACCCGCTGTGATACAAAAGAGAACTCTGATATTGAGCAGATTTTCTTTCATGAAAAAACAGCATATGATGAAGCTGCTTCAGGTAATCCAACAATCTCTCCCTTGGCACAAGAAATTGGTATGAATTTCATTTTTCAAATCTATGCCAAGGAATGGGAAGGAGCTGAAGAAATGAGAAAATTCAACACCGTCAAAGAGATTGAACAACAACAAGATATCAATTTTGCAAAGGATGAGAATGGCTTTGCTGCAGAAGAGGATGGTGTCAAGCAAGTTTCTCCAGGTATGACTCATGATCTCCTAAAGTCTCAGATGAATTTTGAAGGGGATTTCAAAAATTACTTCACTGCTGCTGCAACTGAGGTAGATAACAAAGGGATCTTTCATCTAGGAGAAGATGTTGAAGATGCAGAAGAAAGCCATCCAACTAGCTGGTTTCATGAAGAGACCTGTACAGAAAGGTACTGCAATGTGGCTACATATGACGGCGAACACATGGAGGATATTGAGTCGGATGAGTCCTATTCTCCATGCTGGGAGGAACAACATTTCCGTGAATTCAGCTATGAAGACACTACTGATTCTTCCATCTACTCAGTGGAGAAGATCAACTCAAAACTCGAGTCGCTATCAGAGAGTTCGCATGATATATCTGAAATGTGGTTAGATGACATCTTTAACAGCAATTATGCAGACATTATGGTTGAAGATATCAGACTCCAAGAAGCCAAAGAAGAGGGGTCAATCTGTTTTCAAGCACAGTCTCATTGCACTTATTTTGATCTGCAAGACACAAGTGAAAGCATCGAGTTTCTCACTCAAGAAAAATATTATCCATCCAAAGATATAGATTCTGAGTATGACGAATCTACTTTGAGCGAGGAAGTATTTCAGAATCTAGCTAATGAAAAAGATAACAACAGAGTAAATGAGAAACGTTTGGATTATGAGGTTAGTTGTGTCTCAATGTTACTTGATGAAGAGATAGTTGAAAATAGTGAAGGCCACAGCAGTAGTGAAAGTTGCAAGATTGATGAGAGCTATGAAGACGAAGATGAAAGCCTAGAAAATGACGATGATGATGATGAATTTAGCCAGGAGGACATAATTCACATGTCTAAAGTGCCTGAAGAAAGCACCACCATTATTATTGAGGAGCAACAATTATCAGAGGAAAATGAAGTTAAAGGTGGTAAGTTGAAGAGCACGGGTGGTGAAGAACAGCACACAAGCAAGAATTGGCAATGGGGAACTAAGCGGAAGAGACCTGTAGAAGAGGAAGAAGAAATGAGAAAGATCAACCCACGAAAGCCAAATTTGTTGCCCTTAGTTTCTGAGGTAGAACCAGAGAAAGTTGATCTGAAGCACCAAATGATAGATGAAAGAAAAGATGCAGAGGAATGGATGCTTGATTTCGCACTGAGACAAACTGTCACAAAACTTGCTCCAGCAGGGAAAAGGAAAGTGTCATTACTAGTTGAAGCTTTTGAAGCAGTAATGTCAATGCCCAAATGCGAAGCTCATATAAGAAGTGATTCACCCTTTGCTCATGCAAGACCTATTCAAGCGTGTAGTTGA 2298 0.4056 MVQRIILGNSKPSSSQHQDGRTRKTEVMKKMTKSRSFHLSDFEFSHSSSSSVRSLSQPRKSPNYMKPTSSSEAKKELFSVSHRHTQSSSDGKSVPQKGMRNSKASFVSCKEPAKSLSRSCSLNSMRTLTKSPSFKPCKACSKKLTSAVLFEDVNAPERATCSSTLKEYNFPEYLTLHPGGTESEGVSVMKVCPYTYCSLNGHGHAPLPPLKSFMSERRHLLETRKKDTKLEVVIPQRWKVTRCDTKENSDIEQIFFHEKTAYDEAASGNPTISPLAQEIGMNFIFQIYAKEWEGAEEMRKFNTVKEIEQQQDINFAKDENGFAAEEDGVKQVSPGMTHDLLKSQMNFEGDFKNYFTAAATEVDNKGIFHLGEDVEDAEESHPTSWFHEETCTERYCNVATYDGEHMEDIESDESYSPCWEEQHFREFSYEDTTDSSIYSVEKINSKLESLSESSHDISEMWLDDIFNSNYADIMVEDIRLQEAKEEGSICFQAQSHCTYFDLQDTSESIEFLTQEKYYPSKDIDSEYDESTLSEEVFQNLANEKDNNRVNEKRLDYEVSCVSMLLDEEIVENSEGHSSSESCKIDESYEDEDESLENDDDDDEFSQEDIIHMSKVPEESTTIIIEEQQLSEENEVKGGKLKSTGGEEQHTSKNWQWGTKRKRPVEEEEEMRKINPRKPNLLPLVSEVEPEKVDLKHQMIDERKDAEEWMLDFALRQTVTKLAPAGKRKVSLLVEAFEAVMSMPKCEAHIRSDSPFAHARPIQACS 765
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu5g02377 765 MobiDBLite consensus disorder prediction 570 602 - -
Vimu5g02377 765 MobiDBLite consensus disorder prediction 632 668 - -
Vimu5g02377 765 MobiDBLite consensus disorder prediction 585 602 - -
Vimu5g02377 765 MobiDBLite consensus disorder prediction 632 646 - -
Vimu5g02377 765 MobiDBLite consensus disorder prediction 82 103 - -
Vimu5g02377 765 MobiDBLite consensus disorder prediction 1 105 - -
Vimu5g02377 765 PANTHER CALMODULIN-BINDING PROTEIN-RELATED 9 741 IPR044681 GO:0005516
Vimu5g02377 765 MobiDBLite consensus disorder prediction 17 40 - -
Vimu5g02377 765 ProSitePatterns Cytochrome b5 family, heme-binding domain signature. 173 180 IPR018506 GO:0020037
Vimu5g02377 765 MobiDBLite consensus disorder prediction 570 584 - -
Vimu5g02377 765 Pfam Plant calmodulin-binding domain 651 741 IPR012417 GO:0005516
Vimu5g02377 765 SMART CaM_binding_2 629 741 IPR012417 GO:0005516
Vimu5g02377 765 MobiDBLite consensus disorder prediction 1 16 - -
Vimu5g02377 765 MobiDBLite consensus disorder prediction 41 75 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu5g02377 Vimu-Chr5 34518793 34522047 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vimu5g02377 646 765 Calmodulin-binding Proteins AT2G38800 49.587 1.03e-27 117
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu5g02377 - - gmx:102670203 1018.84