Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu5g02357 ATGGCAGTCATTGAAAAGAGAACACAAAACTCTCTACATCTTCGCAGCAACAGCTTGCCCTCTGCAGCTCACCCTTTTGTATCACAATTTGAGGAGCATTTAAGAAGATTGAGGGCTTCTGAAGCCACTTCTTCATTGTCATCATCTTCAGTGAGCCACAAACTTAACGAGATGCTGGATTTGCAAGATTACACCGATAAGTTGCTTCAATTGACAACTGAACAGCAAGTTTTAGCACGGGAGTGCAATGAAAAATGGGGTGATGATCTACTAGAAGGGTCTCTTAGGCTCTTAGATATCTGTGCTGCAGCTAAAGATTGTCTTCAGCAATCAAAGGAAAGCATGTGCGACTTAGTGTCAGTCATGAGAAGAAAGAAAGGCAATGAAACTGGATTCGCGGTTGAAAGTGTGAAATACTTAGCCATGAGGAAGAAGATCAAGAAGCAAATTCAAAAGGCCCTGCAAAATTTGAAGCACAAGGACAACAACACTTCACCCATGCTCAGCTTCTTAGATGAAGCAGAAGCAATCACCATGAGCTCATTAGAAAGTTTGTTACTTTTTATCTCTGCTCCAAAAGAACATAGCAGATGGTCAGAAATCTCCAAGTTGGTGCGGCCTAAAAGAGTTATTTGTGATTCTCAAGAATCAGCCATAAATGAATTTGAAAAGGTGGATGCAGTTTTGAAGTCTCTCAGCAGTCACAAACCTTCATCGGCTGAGAATTTTCAAAGTCATATGGAAAATTTGGAGCTGTGCATCCAAGATCTGGAGATAGGAGTTGATCACCTCTCAAGAAAATTAATCAGAAACAGAGTTTCCCTTCTCAACATCTTCAACCACTAA 846 0.4078 MAVIEKRTQNSLHLRSNSLPSAAHPFVSQFEEHLRRLRASEATSSLSSSSVSHKLNEMLDLQDYTDKLLQLTTEQQVLARECNEKWGDDLLEGSLRLLDICAAAKDCLQQSKESMCDLVSVMRRKKGNETGFAVESVKYLAMRKKIKKQIQKALQNLKHKDNNTSPMLSFLDEAEAITMSSLESLLLFISAPKEHSRWSEISKLVRPKRVICDSQESAINEFEKVDAVLKSLSSHKPSSAENFQSHMENLELCIQDLEIGVDHLSRKLIRNRVSLLNIFNH 281
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu5g02357 281 Coils Coil 143 163 - -
Vimu5g02357 281 PANTHER OS06G0725500 PROTEIN 9 278 - -
Vimu5g02357 281 Coils Coil 61 81 - -
Vimu5g02357 281 Pfam Protein BPS1 54 278 IPR004320 GO:0048364|GO:0048367
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu5g02357 Vimu-Chr5 34373303 34374148 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu5g02357 - - vra:106778367 489.189