Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu5g02355 ATGGCAACCTCACAGTTGAACTCAAAATCCCATTTCCATGCTCGTTCAAACAGCTTACCTTCTAGACCACACCCACTTATCCTACAATGCAATGAGCACTTGGACAGGTTAAAGGCTTCCCATGAAACCTCCTCTTCCTCTTCAACCCTTAGCCACAAGCTAGGAGGCTTGCGAGATCTACATGAATGTGTAGAAAATTTGTTCCAGCTTCCCCTCACTCAAGAAGCACTTCACCGTGAGAGTCAAGAAAACTGGGTGGATGAGCTTCTGAATGGATCCTTAAGGCTCTTAGATGTGTGCACAACCGCCAAAGACTCTCTACTGCATACAAAAGAGTGCATGAGAGAACTTCAATCAATTATGAGAAGGAGAAAAGGGGGTGAAGTAGAGCTCAGATCAGAGATCAAGAAGTTCTTGACTTCAAGAAAGGTGGTCAAAAAGGCCATCTCAAAAGCCTTGGCGAATTTGAAGGGTACCCCAAGAAAATGCAGCATGTCACCTGCAAACAAAGATAATCAAACAGTTGCTTTGGTTAATTTAATGGAGAACGTGGAAGTGGTCACTCTATCAGCATTTCAGGCACTGCTTCATTTGATCTCAGGGAGTGCACAATCAAAGTCAAGCAGCTGGATTTTGGTTTCCAAGCTAATGCAGACGAAGAAAGTGGGGTGCTCAAAGTTGGCAGATGAATGTGAATTTGCTCAACTTGATGAAGCATTGCAATCCTGCATGTTTTCTCATACAAGTAAATCTGATAACATGAGTAGACTGCAAAACCAGTTGGAGAAAGTGGAGTCGCTTGTTCAAGATCTTGAAGAAGGTTTTGAATTTCTGTTTAGGCGTTTGATTAAGACCAGAGTTTCCCTTCTTAACATCCTCAATCACTAG 888 0.4279 MATSQLNSKSHFHARSNSLPSRPHPLILQCNEHLDRLKASHETSSSSSTLSHKLGGLRDLHECVENLFQLPLTQEALHRESQENWVDELLNGSLRLLDVCTTAKDSLLHTKECMRELQSIMRRRKGGEVELRSEIKKFLTSRKVVKKAISKALANLKGTPRKCSMSPANKDNQTVALVNLMENVEVVTLSAFQALLHLISGSAQSKSSSWILVSKLMQTKKVGCSKLADECEFAQLDEALQSCMFSHTSKSDNMSRLQNQLEKVESLVQDLEEGFEFLFRRLIKTRVSLLNILNH 295
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu5g02355 295 Coils Coil 247 274 - -
Vimu5g02355 295 Pfam Protein BPS1 53 292 IPR004320 GO:0048364|GO:0048367
Vimu5g02355 295 PANTHER OS06G0725500 PROTEIN 9 293 - -
Vimu5g02355 295 MobiDBLite consensus disorder prediction 1 17 - -
Vimu5g02355 295 MobiDBLite consensus disorder prediction 1 25 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu5g02355 Vimu-Chr5 34361352 34362239 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu5g02355 - - gmx:100802945 476.478