Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu5g02352 ATGGAAGGAACTGGAGGCAGCAGTGCCTCGGCTGCTGCACCCGTGAACCAAAAGTGGCAGGAATTTGCAAAGCTATTTCAATATTATCTGGATAAATCCACGCCACACGCCACGTATAGATGGATTGGGAGTTTGGTTATTGTGTCGATCTTTGTTTTGCGGGTTTTTTATGTCCAGGGATTTTACATCGTGTCTTATGGATTGGGCATCTACCTGCTGAATCTGTTGATTGGGTTTCTGTCACCGTTGGTCGATCCTGAGCTGGAGCCTTCTGATGGGCCTTTGCTGCCGACTAAAGGTTCTGACGAGTTCAAACCGTTCATTCGCCGACTGCCTGAGTTTAAGTTCTGGTATTCTTTCACGAAGGCTTTCTGCATAGCATTTATGATGACTTTCTTTTCTGTGTTTGATGTTCCTGTGTTCTGGCCAATATTACTCTGTTACTGGGTTGTTCTGTTTGTCCTTACTATGAGGCGCCAAATTGCACACATGATCAAATACAAATACATACCATTCAACATTGGAAAGCAGAAGTATACTGGCAAAAGATCCTCTGCAAGTAGCAGTGGCAGTCGTGCAGACTGA 585 0.4479 MEGTGGSSASAAAPVNQKWQEFAKLFQYYLDKSTPHATYRWIGSLVIVSIFVLRVFYVQGFYIVSYGLGIYLLNLLIGFLSPLVDPELEPSDGPLLPTKGSDEFKPFIRRLPEFKFWYSFTKAFCIAFMMTFFSVFDVPVFWPILLCYWVVLFVLTMRRQIAHMIKYKYIPFNIGKQKYTGKRSSASSSGSRAD 194
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu5g02352 194 PIRSF AtER_Rer1p 1 190 IPR004932 GO:0016020
Vimu5g02352 194 Pfam Rer1 family 19 180 IPR004932 GO:0016020
Vimu5g02352 194 PANTHER PROTEIN RER1 7 187 IPR004932 GO:0016020
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu5g02352 Vimu-Chr5 34336202 34339281 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vimu5g02352 1 194 Miscellaneous Gene Families AT2G21600 78.462 1.26e-113 320
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu5g02352 - - gmx:100817031 320.472
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vimu5g02352 5 34336202 34339281 Vimu5g02352 5 34336202 34339281 ECH