Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu5g02345 ATGGAGAACAGTAGTAAGATTCTGATAATTGGAGGAACAGGGTTTGTGGGAAAATTCATGGTGGAAGCAAGTGCTAAAGCTGGTCACCCCACCTTCGCCCTGGTTCGAGAGTCCACTCTTTCTGATTCATCAAAATCATCCATCATTCAAACATTCAAAACCTTGGGTGTTAACCTGCTTTTGGGAGATATTCATGACCACCAGAGTTTGGTTAAGGCAATAAAGAAGGTGGATGTGGTGATATCTATGGTGAGTCACAGGCAGTTACAAGATCAATATAAGATCATTTTTGCTATTAAGGAAGCCGGAAATGTTAAGAGGTTCTTTCCTTCGGAGTTTGGACATGATGTGGATCGAACTCATACTGTAAGTGAAGGACAAGAGCTATTTGACAGGAAAGCTAAACTTCGTCGAACCATTGAGGCTGAAGGAATTCCGCATACCTATGTTGTGGCTAACTTTTTCGCTAGATTCTTCCTACCCACTTTGTCAGAACTTCGTTTGATAAAAACACCACTTGATAAGGTTGTTACACTTGGGGATGGAAGCATCAAAGTTGTTCTTAATACGGAAGAAGATGTTGCCACGTACACCATTAGAAGTGTTGATGATCCAAGAACCTTGAACAAAATTCTCTTTGTCCGACCACCAGGTAACACCTTGTCGTACAATGATCTGGTGTCTCTCTGGGAGAAGCATCACTGTGAAACTCTTAAAAGAGTCTATGTCTCGGAAGAGAAAGTTTTGGAGTATATTAAAGAATCTTCATATCCCATCAACATGGGTCTGTCAATTTGCCACTCTGCATATGTGAAGGGAGATCACACTAACTATGAAATTAAGCCTTCATTTGGGTTTGAAGCTTCAAAGCTCTACCCTGACGTGAAGTACACAACTATAGACGAGTTCTTCCACCATAATGATGCTTGCACACCATTTTACTTGAACCAACTTATAACCGTCAATGATGTATAG 975 0.4082 MENSSKILIIGGTGFVGKFMVEASAKAGHPTFALVRESTLSDSSKSSIIQTFKTLGVNLLLGDIHDHQSLVKAIKKVDVVISMVSHRQLQDQYKIIFAIKEAGNVKRFFPSEFGHDVDRTHTVSEGQELFDRKAKLRRTIEAEGIPHTYVVANFFARFFLPTLSELRLIKTPLDKVVTLGDGSIKVVLNTEEDVATYTIRSVDDPRTLNKILFVRPPGNTLSYNDLVSLWEKHHCETLKRVYVSEEKVLEYIKESSYPINMGLSICHSAYVKGDHTNYEIKPSFGFEASKLYPDVKYTTIDEFFHHNDACTPFYLNQLITVNDV 324
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu5g02345 324 Pfam NmrA-like family 7 237 IPR008030 -
Vimu5g02345 324 Gene3D - 6 294 - -
Vimu5g02345 324 Gene3D - 154 304 - -
Vimu5g02345 324 PANTHER PINORESINOL REDUCTASE-RELATED 4 304 - -
Vimu5g02345 324 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 5 255 IPR036291 -
Vimu5g02345 324 CDD PCBER_SDR_a 6 303 IPR045312 GO:0016491
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu5g02345 Vimu-Chr5 34305821 34307462 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu5g02345 K23050 K13266 lja:Lj3g3v3360890.1 439.499
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vimu5g02345 5 34305821 34307462 Vimu5g02345 5 34305821 34307462 ECH