Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu5g02338 ATGATTCCCAGCGCTGGAATTCCTAAAAAGCGGCAACGAACCGCCGCCCGCCGTTCCTCCTCCACTGTCGGCACCATCTCCTCCGTCTCAGACGTAACCCTAACCGAAATCTCCCAACAACACCACCGTCCCTCTTCCATGGCGGATGACCGTCCCTCACCCATGGCGGATGACCGTCCCTCGCCCATGGCGGACGACCGTTCCACTTCCTCCACAGATGAAACTCTCCATTTCAACGACTCTGTCACTGCTGACGTCGTCCTCCGCCTCTTCATGGATTCTCCCTCTCCACTTCAGTCCTCCCCCACCGCCACCTCTGATTCTGTTTCCAATTCTGACTTCCACGTCTACCTCCACTCCGACATCCTCCGCCGCTCCAAATATTTCTCCGCTCTCCTATCCGACCGGTGGATTGGCCACGTCCAAGCGTCGGATCACGCAACCACAGGCGACGGCGACCGCTTCCTCCTCAACCTCGGTGTTCCGCCCGCTACCGGCTCGATCCAGTCTCATCTCACCGTTCTGGAGCTTCTCTACACTAACGACTTCGCCGCCGTGGTGGATAGCGCTTCAACGGCGCTAGATCTGTTGCCGGTGGCGCTGGAGCTGCTGTTCGAGGAGTGTGTGCGTTGGTGCGTGGATTTCCTGGAGGCGGTGCCATGGACGGAGGAGGAAGAGAAGCGAGTGGTGAGATTAATCCCGTTCCTGAGCGAGGAAGAGTCGAAGGAGCTCGTGGCTAGAGTTTCGCCGTCGAGAGAGGACTCATGCGAAGCGATGCTCGAGGGCCTGGTTTCGTCGGCGATGAACAGTTACGGCAACACGGCGTTCGTGAAGGCATTTGTAGGGAAGATACTGAGGGATTTGTCGTCGAGGGAGACGGCGAAGAGAGTGTTGGAGAAGGCGTTCGCTAGAAGCTTGAAAACGGTGAAGGAGTCGTTGGAGGATTATTCGAGTCCAGTGTTCAGAGGGGATCACAACGAGACGGAGGCCATTCAGAAGCTGAATCTGCATAAGGCTTCGACGAATGGGAAGCATCTTCTGTGGCTTGTGGAGAGGATGATTGAGCTTAGGGTTGCGGATGTGGCTGTGAGGGAATGGAGCGAGCAAGCGTGTTTCACCGCTGATTTGCAGAGGGCGTTTCGTGATGATTCTTGGAGGAACATCGTGCCTGGCCTTCCTGCTGTTATTCTTAGATGTACCTGCAGGCTCGCCAATGCCGTTTCTGCTGGCACTATTCTCGCTTCTAGACAGGTGAGAAGGAAGCTGGTAGAAGATTGGTTACCTGTTTTAGTGGTATGCAAAGATAATGTTTCCCCAATTTCACCGAGCAACAAATCGTTGTATCTGGAACTGGAAGAAACATTCTTACGTATCATCTCCACATTGCCCATGTCCGATGCTCAAGAATTGCTGCAGCGGTGCCTCAGCTTTTCAACCCGAAACGTTGACGATTGTCCTCATTTGGTCACTGCATTCAACACCTGGTTCCGCCGTGCAGCCCGACCCCTCAAACCAGATTCTCTCTTTGATCAATAA 1536 0.5462 MIPSAGIPKKRQRTAARRSSSTVGTISSVSDVTLTEISQQHHRPSSMADDRPSPMADDRPSPMADDRSTSSTDETLHFNDSVTADVVLRLFMDSPSPLQSSPTATSDSVSNSDFHVYLHSDILRRSKYFSALLSDRWIGHVQASDHATTGDGDRFLLNLGVPPATGSIQSHLTVLELLYTNDFAAVVDSASTALDLLPVALELLFEECVRWCVDFLEAVPWTEEEEKRVVRLIPFLSEEESKELVARVSPSREDSCEAMLEGLVSSAMNSYGNTAFVKAFVGKILRDLSSRETAKRVLEKAFARSLKTVKESLEDYSSPVFRGDHNETEAIQKLNLHKASTNGKHLLWLVERMIELRVADVAVREWSEQACFTADLQRAFRDDSWRNIVPGLPAVILRCTCRLANAVSAGTILASRQVRRKLVEDWLPVLVVCKDNVSPISPSNKSLYLELEETFLRIISTLPMSDAQELLQRCLSFSTRNVDDCPHLVTAFNTWFRRAARPLKPDSLFDQ 511
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu5g02338 511 MobiDBLite consensus disorder prediction 17 42 - -
Vimu5g02338 511 PANTHER OSJNBA0011J08.25 PROTEIN-RELATED 68 500 IPR038920 -
Vimu5g02338 511 MobiDBLite consensus disorder prediction 43 64 - -
Vimu5g02338 511 MobiDBLite consensus disorder prediction 1 76 - -
Vimu5g02338 511 Gene3D Potassium Channel Kv1.1; Chain A 61 248 IPR011333 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu5g02338 Vimu-Chr5 34243094 34245688 Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu5g02338 - - vra:106756147 956.822
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vimu5g02338 5 34243094 34245688 Vimu5g02338 5 34243094 34245688 ECH