Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu5g02335 ATGGACGAGAAGCTCATACAGCGGTTAGAATCGGCGGTGTCGCGCTTAGAGTCGCTCTCCGCCGGATTCCAACCATCGGCCTCGCCGGCCAGCACCGGCGACGATGTGGTGCGCGATCCGTCCGTCGTTGCGTTCGCCGATCTGATCGACCAGTACGTCGCTAGGTTTTCCCGCGCTGCGGAGGTTATCGGAGGACCGGTCTTGGATGTGTCGAAACTTGTGCAGGAAGCTTTCAATGTTCAGAAAGGACTTTTGATTGAGCTCAAACAAACACAGGTTCCATGTTCCGTGGGGTATTTGAGTATACAATTGCTTGTAAAGCGAAATTCAGAAGCAATTGCTCGTGCAATAAGAGGTTTACCGCCAAGAAAGAAGCCTGACCTTGCTGGGTTGGGTTCATTTCTCAAACCATTGAATGAAGTGATCACGAAAGCTGGCAAATTGACAGAGGGAAGGAGATCTGATTTTTTTAATCACTTGAAAGCTGCTGCTGACAGTCTCTCAGCTCTAGCATGGATTGCATATACAGGGAAGGATTGTGGCATGAGTATGCCAATTGCGCATGTGGAAGAAAGCTGGCAAATGGCTGAGTTTTACTGCAACAAGGTGCTTGTAGAGTACAGAAACAAAGACCCAAATCATGTTGAATGGGCAAAAGCTCTTAAAGAGATGTATCTACCTGGATTGAGAGATTATGTCAAGAGCTTTCATCCTTTGGGCCCTGTTTGGAGTCCAAAAGGAAAAGTATATGCTCCATCAAAAGCTGCTCCTGCTGCACCTGCCGCCCCTCCCCCTCCATCTGCTTCTCTATTTAGTTCTCAATCATCTCAGGCTTCATCTTCTAAACCTAAAGAGGGCATGTCAGCTGTTTTTCAGCAAATCAGTGAAGGAAACGTCACTTCAGGTTTGAGAAAGGTTACGGCTGATATGAAAACTAAGAATCGCGCCGATAGAACTGGAGTTGTTGGCACTATTGAAAAAGAAAGTCATGCAACTTCACGTGTGCCTTCTAAAGCAGGACCTCCAAAATTTGAACTTGAAATGGGCCGCAAATGGGTTGTAGAAAATCAAATTGAAAAGAAAGATTTGGTTATTGGAGATTGTGATGCAAAACAGTCTGTATATGTTTATGGATGCAAAAACTCTGTTTTGCAGATTCCAGGCAAGGTCAACAATATAACTATTGACAAATGCACAAAGATGGGAGTTGTATTTAAGGATGTTGTTGCAGCATTTGAGATTGTAAACAGTAGTGGGGTTGAGGTTCAATGCCAGGGTGCAGCTCCTACAATTTTAGTGGACAACACTTCTGGCTGCCAGCTATATCTGAGCAAGGACTCTTTACAAACATCCATAACTACAGCAAAGTCAAGCGAGATCAATGTCTTGGTTCCTAGTGCTGAAACCGATGGTGACTGGGTGGAGCATTCTTTGCCACAACAATACATTCATGTGTTCAAGGATGGACATTTTGAAACAACACCTGCTTCTCATTCTGGAGGTTAA 1506 0.4495 MDEKLIQRLESAVSRLESLSAGFQPSASPASTGDDVVRDPSVVAFADLIDQYVARFSRAAEVIGGPVLDVSKLVQEAFNVQKGLLIELKQTQVPCSVGYLSIQLLVKRNSEAIARAIRGLPPRKKPDLAGLGSFLKPLNEVITKAGKLTEGRRSDFFNHLKAAADSLSALAWIAYTGKDCGMSMPIAHVEESWQMAEFYCNKVLVEYRNKDPNHVEWAKALKEMYLPGLRDYVKSFHPLGPVWSPKGKVYAPSKAAPAAPAAPPPPSASLFSSQSSQASSSKPKEGMSAVFQQISEGNVTSGLRKVTADMKTKNRADRTGVVGTIEKESHATSRVPSKAGPPKFELEMGRKWVVENQIEKKDLVIGDCDAKQSVYVYGCKNSVLQIPGKVNNITIDKCTKMGVVFKDVVAAFEIVNSSGVEVQCQGAAPTILVDNTSGCQLYLSKDSLQTSITTAKSSEINVLVPSAETDGDWVEHSLPQQYIHVFKDGHFETTPASHSGG 501
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu5g02335 501 SUPERFAMILY N-terminal domain of adenylylcyclase associated protein, CAP 123 266 IPR036222 -
Vimu5g02335 501 PANTHER ADENYLYL CYCLASE-ASSOCIATED PROTEIN 2 500 IPR001837 GO:0003779|GO:0007010
Vimu5g02335 501 SUPERFAMILY N-terminal domain of adenylylcyclase associated protein, CAP 41 98 IPR036222 -
Vimu5g02335 501 ProSiteProfiles C-CAP/cofactor C-like domain profile. 341 478 IPR017901 -
Vimu5g02335 501 SUPERFAMILY C-terminal domain of adenylylcyclase associated protein 341 500 IPR036223 -
Vimu5g02335 501 Gene3D - 340 500 IPR016098 -
Vimu5g02335 501 ProSitePatterns CAP protein signature 1. 5 17 IPR018106 -
Vimu5g02335 501 MobiDBLite consensus disorder prediction 253 287 - -
Vimu5g02335 501 MobiDBLite consensus disorder prediction 268 287 - -
Vimu5g02335 501 SMART carp 379 416 IPR006599 -
Vimu5g02335 501 SMART carp 417 454 IPR006599 -
Vimu5g02335 501 FunFam Adenylyl cyclase-associated protein 340 500 - -
Vimu5g02335 501 Pfam Adenylate cyclase associated (CAP) C terminal 341 498 IPR013912 GO:0003779|GO:0007010
Vimu5g02335 501 Pfam Adenylate cyclase associated (CAP) N terminal 3 57 IPR013992 GO:0003779|GO:0007010
Vimu5g02335 501 Gene3D - 102 248 IPR036222 -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu5g02335 K17261 - gmx:100793194 751.51
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vimu5g02335 5 34228294 34232028 Vimu5g02335 5 34228294 34232028 ECH