Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu5g02325 ATGGGCGAAAAATATAAGCCGTGGATCATCTTTCTTTTTCTACTGATAATCACGTGTTCTAGAGCCAGGGAATTGGTTGGAAGTGGAGCAGAAAACAAAATCTTGGAAGCAATCTCTGATGAGAATCATGAAACAGTGCACACAGAACATGAACATGCACATGTTCATTCCCACATGGATCACATGGACCCTTCTGTGATGGTGTTCCTCACCTTCGAAGATTTGAAGGTTGGAAAAACAATGGCAGTTTATTTTCCCAAGAGGGACCCTGCAACCTCCCCCAAGTTATGGCCGAGAGAAGAAGCCGAGTCACTCCCTTTCTCATTGAACCAACTCCCAAATCTCCTAAAAGTCTTCTCTTTTTCACCAAACTCTCCCCAAGCAAAAGCCATGGAAGACACTCTGAGGGAATGTGAGAGTAAAGCCATCAAAGGAGAGGTAAAGTTCTGCGCCACCTCTTTAGAATCCATGCTTGACTTTGCTCAAACCATTCTTGGCTCCACACATGAACTTCAAGTTTTCACCACCTCCCACCAAACCAAATCCCTTGTCACTTTCCAAAACTACACTTTCGAAAGCATAGTAGAGATCCCAGCTTCCAAGATGGTGGCTTGCCACACCATGCCTTACCCTTATGCTGTTTTCTACTGTCACAGCCAAGAAAGTGAGAACAAGATGTATAAGGTGGCACTTGGCGGTGAAAACGGGGATAGGGTGGAAGCTATGGTTGTTTGTCACATGGATACCTCCCATTGGGGTCATGGTCATGTTTCATTTCAAGTTCTGAAGGTTGAACCAGGAACCACTTCTGTGTGCCACTTTTTCCCAGCAGATAATCTCATCTTGGTTCCCAAACCTGAACAGCACGGTCTTGCAACCATGTGA 885 0.452 MGEKYKPWIIFLFLLIITCSRARELVGSGAENKILEAISDENHETVHTEHEHAHVHSHMDHMDPSVMVFLTFEDLKVGKTMAVYFPKRDPATSPKLWPREEAESLPFSLNQLPNLLKVFSFSPNSPQAKAMEDTLRECESKAIKGEVKFCATSLESMLDFAQTILGSTHELQVFTTSHQTKSLVTFQNYTFESIVEIPASKMVACHTMPYPYAVFYCHSQESENKMYKVALGGENGDRVEAMVVCHMDTSHWGHGHVSFQVLKVEPGTTSVCHFFPADNLILVPKPEQHGLATM 294
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu5g02325 294 PANTHER BURP DOMAIN PROTEIN USPL1-LIKE 37 284 IPR044816 -
Vimu5g02325 294 SMART BURP_2 67 285 IPR004873 -
Vimu5g02325 294 Pfam BURP domain 69 283 IPR004873 -
Vimu5g02325 294 ProSiteProfiles BURP domain profile. 69 285 IPR004873 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu5g02325 Vimu-Chr5 34152384 34153351 Dispersed/Proximal
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu5g02325 - - gmx:100800777 452.981
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vimu5g02325 5 34152384 34153351 Vimu5g02325 5 34152384 34153351 ECH