Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu5g02314 ATGGAGGCATGGAAGAAGCAGGTTTTGATTGTGATGCTGATGGTGTTGGGCATGGTGACGATCGAAGTGAATGCGCAATCGTTCTGCCGCATGCCGAAAGATGGGTTGAAGGCATGCTTAGCGAGTGTGAGTGGGGACAACCCTGTGGATCCAAACTCTGATTGTTGCTCAGCCATTGCAAAGGCTGATCTTCAGTGCTTCTGCCGCTACAAGGATTCGGGATTGCTCTCTCTCTATGGTGTTGATCCCAACAAATGCATGCAACTCCCTGTTAAGTGCAAGGTTGTCGACTCTTTCCACTGCTAG 306 0.5 MEAWKKQVLIVMLMVLGMVTIEVNAQSFCRMPKDGLKACLASVSGDNPVDPNSDCCSAIAKADLQCFCRYKDSGLLSLYGVDPNKCMQLPVKCKVVDSFHC 101
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu5g02314 101 CDD nsLTP_like 29 101 IPR044741 -
Vimu5g02314 101 SUPERFAMILY Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin 29 99 IPR036312 -
Vimu5g02314 101 Gene3D - 25 101 IPR036312 -
Vimu5g02314 101 Pfam Probable lipid transfer 20 100 IPR016140 -
Vimu5g02314 101 PANTHER LIPID BINDING PROTEIN-RELATED 8 97 IPR039265 GO:0005504|GO:0009627
Vimu5g02314 101 SMART aai_6 29 101 IPR016140 -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vimu5g02314 5 101 Acyl Lipid Metabolism Gene Families AT5G48490 36.735 2.52e-17 69.3
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu5g02314 - - gmx:100305636 156.762