Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu5g02305 ATGGAGGCTTTCTCCCTACAGTCCCTCACTCTAACCACCATCCCCTCCTCTTTGTCACAGAGAGGGGCCACTGAAAAACCTTGTGCCCATGTCAATCTTTCCCATTTCACAAGGTACCCTTGTTCCACAACATCAACAAAACACAGAATTCGTTGCACCAGAACTCAAGCTTCAGGTTCAACTAAATCTAGTGTGGGTACTGCTGAGGGGATATCTGAGAAAACAGACTCCAAGGATGACAACTTGGTATTTGTTGCGGGTGCTACTGGTAAAGTTGGTTCACGGACAGTGAGGGAGCTGATAAAGCTTGGATTTAGAGTCAGAGCTGGAGTGCGGAGTGCTCAGAGGGCGGGTACATTAACTAAGAGTGTTCAGGAATTGAAACTTGATGGTTCAAGTGCAACTGGAGGGGGACAAGCTGTAGAGAAGCTTGAAATTGTAGAATGTGATTTGGAGAAACCGGATACGATTGGATTGGCTTTAAGCAATGCATCAACAGTGATATGTACCATTGGTGCCAGTGAGAAGGAAGTTTTTGACATCACTGGACCCTTTCGGATAGATTATCAGGCCACCAAAAATCTAATTGATGCTGCAACTGTTGCCAAAGTAAATCACTTCATATTGGTTACTTCACTGGGAACGAACAAAATTGGCTTCCCTGCAGCTATCCTCAAGAAGGCAGAAGAAGCACTGGTGGCCAGTGGACTTCCATACACAATAGTGAGACCTGGAGGTATGGAGCGGCCTACAGATGCTTTCAAGGAAACTCATAATATAACCCTGTCAACCGAAGATACTTTATTTGGGGGTCTGGTGTCAAACCTTCAGAACAATAGGATTTGCTGCCCCATGTGGCTTGTATATTCGGAAAGTAATGTAAATATGTTGGTAGTAGTTGTTGCCTCTTATGAATATCAGTACGTGCTGTTGATTAAATTGATTGCTGAACTCTTGGCAGTCATAGCCAAGAACCGTGATCTATCATATTGTAAAATAGTGGAGGCAACTGCAGAGACAACTGCACCGCTGACTCCCATGGAGGAACTTCTTGCAAAGATACCTTCTCAACGTCCTTACATTTCTTCACCCAAGGTACTTCCTCCATTGAGGAAACCAGACATTCCAGCGCCCAGTATTCCAGATCCCCCTGCCAATGTTGTGACAGTGGAACCTAGTATTGCCACTGAGCAAGAAGCTTCACAACCTAAACCAGTGGCAAAACAGCCACTTTCTCCCTATACTGCTTATGATGATTTAAAGCCACCAACATCTCCTACACCATCTCAGCCCGGTAGTGAGAAACAAGCAAAGATCAGTGAGACAGTGACAAAACCAAGTGTTTCGGATACTCCGAGTAGTGTGCCAGGAGTAGATGGCATCACTCAGGCAACATCTTCACCCAAAGTGGAGAAGCCTCTTTCTCCTTATGTAGCATATCCTGACTTAAAACCTCCCACTTCACCATCTCCTAATGCACCAGTTGTATCAGTTTCCACATCTGCTGCTGATGGTGTGCCACAGATAGACACAATTTCAAGTAATGGAACACCACAACTTTCAACACCAGATGAACCAAAGGAAGAACATCTCCCCGAACCCAAGTCAAGACCACTGTCACCTTATACGATGTATGAGGACTTGAAGCCTCCTGCATCACCATCACCTTCCTTCAGAAATTTCTAG 1686 0.4508 MEAFSLQSLTLTTIPSSLSQRGATEKPCAHVNLSHFTRYPCSTTSTKHRIRCTRTQASGSTKSSVGTAEGISEKTDSKDDNLVFVAGATGKVGSRTVRELIKLGFRVRAGVRSAQRAGTLTKSVQELKLDGSSATGGGQAVEKLEIVECDLEKPDTIGLALSNASTVICTIGASEKEVFDITGPFRIDYQATKNLIDAATVAKVNHFILVTSLGTNKIGFPAAILKKAEEALVASGLPYTIVRPGGMERPTDAFKETHNITLSTEDTLFGGLVSNLQNNRICCPMWLVYSESNVNMLVVVVASYEYQYVLLIKLIAELLAVIAKNRDLSYCKIVEATAETTAPLTPMEELLAKIPSQRPYISSPKVLPPLRKPDIPAPSIPDPPANVVTVEPSIATEQEASQPKPVAKQPLSPYTAYDDLKPPTSPTPSQPGSEKQAKISETVTKPSVSDTPSSVPGVDGITQATSSPKVEKPLSPYVAYPDLKPPTSPSPNAPVVSVSTSAADGVPQIDTISSNGTPQLSTPDEPKEEHLPEPKSRPLSPYTMYEDLKPPASPSPSFRNF 561
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu5g02305 561 CDD SDR_a5 83 277 - -
Vimu5g02305 561 MobiDBLite consensus disorder prediction 430 470 - -
Vimu5g02305 561 MobiDBLite consensus disorder prediction 369 385 - -
Vimu5g02305 561 PANTHER PROTEIN TIC 62, CHLOROPLASTIC 1 278 IPR044719 -
Vimu5g02305 561 MobiDBLite consensus disorder prediction 391 405 - -
Vimu5g02305 561 MobiDBLite consensus disorder prediction 493 522 - -
Vimu5g02305 561 Gene3D - 79 354 - -
Vimu5g02305 561 MobiDBLite consensus disorder prediction 363 561 - -
Vimu5g02305 561 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 80 255 IPR036291 -
Vimu5g02305 561 Pfam NAD(P)H-binding 87 259 IPR016040 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu5g02305 Vimu-Chr5 33989372 33993679 Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu5g02305 - - gmx:100779056 811.216
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vimu5g02305 5 33989372 33993679 Vimu5g02305 5 33989372 33993679 ECH