Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu5g02297 ATGGAACGTGATGAAGAAGAATTCTGGGGAGTTGGGTCTCAAGTTTTTCTTGAAATTGCTCCATCAGCTCAGAAATTGTTCTCTTTCTTGAGAGATTCAACCGTTCCTTTGGAGCAAAACCCCAAGCTCAAGCCCCATGCAACGTCTGTCTTTGTAATGACCTGTGATTCAGCAGTTCAACTCCGGAAAGCTGGGAAAGTCACTGTCAGAGAATCAACCTTGAAAAAATTAGGTGCTACCCATTTTAGAACTGGCGTTGCAAACGAGCATTTTGAGGTGACAAAGTTTGCACTTTTGGAGACCATAAAAGAAGCTGTACCTGATATGTGGTCACCAGAGATGAAGAATGCATGGGCAGAAGCTTATGATCAGCTGGTGGATGCCATTAAATCTGAAATGAAACCACCCTCCTCTTAG 417 0.4341 MERDEEEFWGVGSQVFLEIAPSAQKLFSFLRDSTVPLEQNPKLKPHATSVFVMTCDSAVQLRKAGKVTVRESTLKKLGATHFRTGVANEHFEVTKFALLETIKEAVPDMWSPEMKNAWAEAYDQLVDAIKSEMKPPSS 138
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu5g02297 138 Pfam Globin 16 129 IPR000971 GO:0020037
Vimu5g02297 138 Gene3D Globins 8 132 IPR012292 GO:0019825|GO:0020037
Vimu5g02297 138 PANTHER LEGHEMOGLOBIN-RELATED 15 134 IPR001032 GO:0019825|GO:0020037
Vimu5g02297 138 SUPERFAMILY Globin-like 14 134 IPR009050 -
Vimu5g02297 138 ProSitePatterns Plant hemoglobins signature. 40 51 IPR019824 GO:0019825|GO:0020037
Vimu5g02297 138 PRINTS Plant globin signature 40 68 - -
Vimu5g02297 138 PRINTS Plant globin signature 12 32 - -
Vimu5g02297 138 PRINTS Plant globin signature 105 131 - -
Vimu5g02297 138 ProSiteProfiles Globin family profile. 16 134 IPR000971 GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu5g02297 Vimu-Chr5 33948459 33949241 Proximal
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu5g02297 - - var:108340568 241.891
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vimu5g02297 5 33948459 33949241 Vimu5g02297 5 33948459 33949241 ECH