Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu5g02295 ATGAAATACAGTGAGATATCCCATTTCAGCCACCCACAACACAAGCTGAGATTTGAGTACTCAGAATTCCCCTTCAAATGTGACGGCTGCAAGGAAGTAGGCATAGGGTCGCGTTACAAATGCTCCATCTGTGACTTCGACCTTCACATGCACTGTGCCATGATAACCTCTCCCAGTTTGTTCCACCCTTTCTACACCAAATGCAGCTTCCAGTTCATGTCCAAACCTCCAGGAGACACACCCCGTTACTGCAACGCATGCGAGAAGGACGTGAGTGGCTTCGTGTACCACTGCAAAGCATGCGGCTTCGACCTCCACCCTTGTTGTGCCAAGCTACCAATGGTTCTTGATGATGGTGAAGTGAAGCTTTACTTGTACAGAAAAGTTAGCTCACCCTGTCACCGTTGTGGCAGAAAAGGGCGTAGCTGGAGTTACAGGTCCAAGTGTAAGAACTACAATCTGCATGTGGCGTGTGTGAGGGAGATGTTGGTGGAGAATTGGCACGAGGTGTATGTTGGACGCTGCAAAGGAAGGAATGTTGATAGCAACATTCCTAGTCTGAGAAACACACTCTACACTCCTCATAGCAGTAGGAGGAGTAAAGGGAAGGTGAAGAAGTGCTGTGAAATTGCTGGTTTGGCTGTGCAGATTGTGATATCAGCTGTGTTGGGAGATCCAACGGCTCTCATTGCAGGCATTGTGGGGTCCTTCATGTCAAGGGCTTGA 726 0.4876 MKYSEISHFSHPQHKLRFEYSEFPFKCDGCKEVGIGSRYKCSICDFDLHMHCAMITSPSLFHPFYTKCSFQFMSKPPGDTPRYCNACEKDVSGFVYHCKACGFDLHPCCAKLPMVLDDGEVKLYLYRKVSSPCHRCGRKGRSWSYRSKCKNYNLHVACVREMLVENWHEVYVGRCKGRNVDSNIPSLRNTLYTPHSSRRSKGKVKKCCEIAGLAVQIVISAVLGDPTALIAGIVGSFMSRA 241
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu5g02295 241 Gene3D - 78 112 - -
Vimu5g02295 241 SUPERFAMILY Cysteine-rich domain 60 116 IPR046349 -
Vimu5g02295 241 SUPERFAMILY Cysteine-rich domain 4 56 IPR046349 -
Vimu5g02295 241 ProSiteProfiles Zinc finger phorbol-ester/DAG-type profile. 13 68 IPR002219 -
Vimu5g02295 241 Pfam C1 domain 74 110 IPR004146 -
Vimu5g02295 241 Pfam C1 domain 9 53 IPR004146 -
Vimu5g02295 241 PANTHER CYSTEINE/HISTIDINE-RICH C1 DOMAIN FAMILY PROTEIN 4 238 - -
Vimu5g02295 241 Gene3D - 17 66 IPR043145 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu5g02295 Vimu-Chr5 33940426 33942782 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu5g02295 - - gmx:100790779 495.352