Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu5g02293 ATGGATGAAGTACCTGGCTCCTTGGGCACCAGCGCTAGCTTCAGTCTGAGAATGGGCCAGACCATGTTCTCATCTGCTTCCCTTCTCTTCATGTCTTTTGGGGTTGAATTCTACAGCTACACGGCTTTCTGTACAATCGAATTTGTTGATTCTTCTGTTAATCAACTGGTTTATTTTTATGTTTACTATCCATGTCCAAGCTATTTGGTGACAATTATGGGGTTGGTCATACCGTGGAGTTTCACATTAGCACTAGTAGATGGATATTCGGTTCTGCTCAAATGCCCCATTCGTCAACCAGGAATTCTGCTGATTATTGTTGTGGGAGATTGGGTACTATCAACCCTCACACTAGCAGCAGCTTCCTCAACAGCTAGTGTTGTGGATCTTCTGCTCAACACTCACGGGTCTTTTTGCCCTCAAAAGCTCTGCAGCAGGTACAGGATATCTGCAATTATGGCCTTCTTGTCATGGTTTCTATCTTTGGCATCCTCTCTATTTAACCTTTGGCTATTACCCTCTTTGTGA 528 0.4394 MDEVPGSLGTSASFSLRMGQTMFSSASLLFMSFGVEFYSYTAFCTIEFVDSSVNQLVYFYVYYPCPSYLVTIMGLVIPWSFTLALVDGYSVLLKCPIRQPGILLIIVVGDWVLSTLTLAAASSTASVVDLLLNTHGSFCPQKLCSRYRISAIMAFLSWFLSLASSLFNLWLLPSL 175
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
Vimu5g02293 175 Pfam Casparian strip membrane protein domain 9 160 IPR006702 -
Vimu5g02293 175 PANTHER CASP-LIKE PROTEIN 5B3 1 174 IPR045009 -
       

Duplication type information


Select Gene Chromosome Start End Duplicated_type
Vimu5g02293 Vimu-Chr5 33933757 33935281 Dispersed
       

Pathway information


Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu5g02293 - - vum:124821668 246.128