Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu5g02291 ATGGCTGAGGTGTACACTGTGAAGGTGGAGGAGGCAAGGTTGGAAACTGTTGAAAAACCTTCAGCAGGTCCTGTCTACAGGTGCATCTATGCCAGAGATGGTTTGATGGAACTGCCTTCTCATTTTGAATCTCCATCGGACTTCTTCAGGGACACGACGAAGAGGTGCCCCAGCAACCCTATGCTGGGTCGGCGTCAAAAAACGGATTTGAAGGCTGGTCCCTATGAATGGATGACATATCAGGAGGCTTATGATGCCTCCATTCGAATTGGTTCAGCCATGAAGAGCCGTGGTGTCAATCCTGGAGACCGATGTGGCATATATGGGTCTAACTGCCCTGAATGGATCCTTGCAATGGAGGCTTGCAATAGCTACGCAGTAACATATGTTCCATTATATGACACCCTGGGTCCCAATGCTGTGGAGTTTATCATAAACCATGCTGAAGTTTCGATGGCATTTGTACAGGATAGCAAGATTCCTTCTGTTTTGTCATGCCTTGGTCGCTGTTCAAATCTTAAAACTATTGTGAGTTTCGGTAATGTTCTATCTGGAGAAAAGAGGGAAGCTGAGGAGCTTGGTGTATCTTGCTTCTCGTGGGAAGAGTTTCTGCAGTTGGGAGATCTGGATTCAGACATACCACTGAAAAAGAAGACTGACATATGCACAATCATGTATACAAGTGGAACAACGGGCGAACCCAAAGGTGTCATTATCAAGAATGAGGCTTTCATGGCTCAAGTGTTGTCTATTGACCAAATGCTTGAATTAACTGACAAAGCGGGAACAGAAGACGATGTGTACTTCTCTTTCCTTCCTCTTGCTCATGTATACGACCAGATAATGGAAACCTATTGGGTTTATAAGGGTTCTTCAATTGGATTTTGGCAAGGAGATGTCAGGTTCTTAATGGAAGATGTTCAGGTGTTGAAACCAACTATATTTTGTGGTGTCCCTAGAATTTATGACCGTGTATATGCTAATTCTAATGACAGCAAGTTGGGATATATGGAGAAGGGTCTTCCCCAAGACAAAGCAGCACCTTTGTTTGATAAGCTTGTGTTTGATAAGATAAAACAAGCATTAGGTGGACGCGTTCGTCTTCTGTTATCAGGTGCTGCTCCTTTGGCCAGGCACGTGGAGGAGTTTTTGAGGGTTACTTTTGGAGCTACTATGCTGCAAGGATATGGTCTTACTGAAAGTTGTGGTGGGTGTCTCACTGCAATAAGCAATGTGTTTTCTATGATGGGAACAATTGGAGTCCCTACAACAACCATTGAGGCCAGGCTTGAATCTGTGCCAGAGATGGGATATGATGCACTCTCCACTGAAGCCCGTGGAGAAATTTGCCTGAGGGGGAATACCTTGTTCTCTGGTTACCACAAGCGTCAAGATCTTACTGAAGAAGTTCTGGTTGATGGTTGGTTTCATACAGGTGACATTGGAGAATGGCAGCCAAATGGAGCCATGAAAATTATTGACAGAAAAAAGAATATCTTTAAATTGTCTCAAGGAGAATATGTTGCTGTGGAGAATATTGAAAACAAGTATTTACAGTGCCCCCTTATAACATCGATTTGGGTCTATGGAAACAGTTTTGAATCGTTTTTGGTGGCAGTGGTGGTCCCTGAAAGAAAGGCCCTTGAGGATTGGGCAGTGAAGAATAATTATACAGATGATTTTAAATCTGTATATGAAAATCCAAAGGCAAGAAAATACATTTTGGATGAGCTCAATAGCACTGGTCAGAAACACCAACTTAGAGGTTTTGAAATGCTAAAAGCAGTTCACCTTGAACCAATTCCCTTTGACATGGAGAGAGATCTGATAACTCCAACATTCAAGTTGAAGAGACCGCAATTGCTCAAGCACTACAAGGATTGTATTGATCAACTATACAAGGAAGCAAAGGCATAG 1917 0.4298 MAEVYTVKVEEARLETVEKPSAGPVYRCIYARDGLMELPSHFESPSDFFRDTTKRCPSNPMLGRRQKTDLKAGPYEWMTYQEAYDASIRIGSAMKSRGVNPGDRCGIYGSNCPEWILAMEACNSYAVTYVPLYDTLGPNAVEFIINHAEVSMAFVQDSKIPSVLSCLGRCSNLKTIVSFGNVLSGEKREAEELGVSCFSWEEFLQLGDLDSDIPLKKKTDICTIMYTSGTTGEPKGVIIKNEAFMAQVLSIDQMLELTDKAGTEDDVYFSFLPLAHVYDQIMETYWVYKGSSIGFWQGDVRFLMEDVQVLKPTIFCGVPRIYDRVYANSNDSKLGYMEKGLPQDKAAPLFDKLVFDKIKQALGGRVRLLLSGAAPLARHVEEFLRVTFGATMLQGYGLTESCGGCLTAISNVFSMMGTIGVPTTTIEARLESVPEMGYDALSTEARGEICLRGNTLFSGYHKRQDLTEEVLVDGWFHTGDIGEWQPNGAMKIIDRKKNIFKLSQGEYVAVENIENKYLQCPLITSIWVYGNSFESFLVAVVVPERKALEDWAVKNNYTDDFKSVYENPKARKYILDELNSTGQKHQLRGFEMLKAVHLEPIPFDMERDLITPTFKLKRPQLLKHYKDCIDQLYKEAKA 638
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu5g02291 638 Pfam AMP-binding enzyme 69 503 IPR000873 -
Vimu5g02291 638 FunFam Fatty acyl CoA synthetase 2 39 495 - -
Vimu5g02291 638 PANTHER LONG-CHAIN-FATTY-ACID--COA LIGASE 18 633 - -
Vimu5g02291 638 Pfam AMP-binding enzyme C-terminal domain 513 582 IPR025110 -
Vimu5g02291 638 CDD LC-FACS_euk 73 634 IPR045311 GO:0004467|GO:0006631
Vimu5g02291 638 ProSitePatterns Putative AMP-binding domain signature. 224 235 IPR020845 -
Vimu5g02291 638 SUPERFAMILY Acetyl-CoA synthetase-like 39 634 - -
Vimu5g02291 638 Gene3D - 34 495 IPR042099 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu5g02291 Vimu-Chr5 33918007 33924123 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vimu5g02291 5 638 Acyl Lipid Metabolism Gene Families AT4G23850 53.670 0.0 752
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu5g02291 K01897 - gmx:100790068 1161.75