Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu5g02288 ATGGAGTTTGTTCCAGAAGAGGGCAAGCACCTTAACGAGGATTGCTCCACTTTGATTTTACCTGCTCTGTCGATTGGCAATGTGGGGCAGCTTGTTGCGGATCTTTTGATTTCATCAATGGGTTCAGAGAGAGTTGGGTATTTGGACGATCCTAACGTTTTGCCCTGTGTTGGCAATGATGCTTATGGACCCTTTCCTCAAGGAGACCTTGCACTCCCCCTTGAAGCTTATGATTCTCCTTCTAATGCTCTCACTATCATCCAACAGAGATCGCCGGTAATTAAGGGTATGATGGTTCAGTTTGCAAAAAACATGGCTGATTTTCTTGCTGGCAGTGGAAAGAAACATATTATTGTTCTCTCCAGCTTAGATTTTGGAAAGTGGCAAAAAGTTGATATGTCAAGTATTTTAAATCCAACTTGGTTTAGGAAATTGCATCGTCATTCTTTCCATTCTGATACATCTATTGGCTATCACATTAGTGGTTTGCAGATATATTATCTTTCTAGTGCCAACAGCAATGGAACTGATGAAAACTGCGAACAGCTTGGATGGAAGAAACTTCAGGAGTATGATCCTTCTCAAAAGCATTGGAAATATCTTAGTGATTTAGCTGAAGGAAATGTTACACTGGAAGATATTATTTCTGTAGAAGATGAGCTAGAAGAAGAAAATTATTATGCTAGCTTGCCTTTTGCTGCACTTTTTACTTTTCTCAAGGCTAAAGGTTTGAAGGTCACCTGCTTGTTGTGTTATTGCTCAGAAGGGGACAATGTATCGGATGCTTTTCAATTAGCCGATGCAACATATAAACTTCTCCAGATGACTCACCCTTCTACTGGAATTGAAAGTGGCACATGGCGAGTGCCACTTTCTTGGATGAGTGTGTATGGACCACCCCCAGATGTGTCCATCTTCTAA 921 0.4093 MEFVPEEGKHLNEDCSTLILPALSIGNVGQLVADLLISSMGSERVGYLDDPNVLPCVGNDAYGPFPQGDLALPLEAYDSPSNALTIIQQRSPVIKGMMVQFAKNMADFLAGSGKKHIIVLSSLDFGKWQKVDMSSILNPTWFRKLHRHSFHSDTSIGYHISGLQIYYLSSANSNGTDENCEQLGWKKLQEYDPSQKHWKYLSDLAEGNVTLEDIISVEDELEEENYYASLPFAALFTFLKAKGLKVTCLLCYCSEGDNVSDAFQLADATYKLLQMTHPSTGIESGTWRVPLSWMSVYGPPPDVSIF 306
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu5g02288 306 PIRSF UCP010044 14 140 IPR016562 -
Vimu5g02288 306 PIRSF UCP010044 147 306 IPR016562 -
Vimu5g02288 306 Gene3D - 216 306 IPR038389 -
Vimu5g02288 306 Gene3D - 14 156 IPR038389 -
Vimu5g02288 306 FunFam Proteasome assembly chaperone 2 215 306 - -
Vimu5g02288 306 FunFam Proteasome assembly chaperone 2 14 144 - -
Vimu5g02288 306 PANTHER PROTEASOME ASSEMBLY CHAPERONE 2 1 135 IPR016562 -
Vimu5g02288 306 Pfam PAC2 family 18 267 IPR019151 -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu5g02288 K11876 - gmx:100812348 531.176
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vimu5g02288 5 33900176 33903334 Vimu5g02288 5 33900176 33903334 ECH