Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu5g02282 ATGGCTTCGCTTCTGAAAAATCTACGTCCCGGTGTGCCTTCAGTTCATGATGCTGGTGGTGATTTCAGCTATGAGTACTCTTTTGCTGAGGAATACAAAGGCCCTCCTCTTGGCTACTCCGTCCCAGAAGTTCTTCCTTTCAACCTTGACCAAGTCCCTTTTGCACCTGTTGCTCATTCTCCCCCTAACAACTTGTCCCTCCCAGTTATCCAACCCTTTAGAAAAACCAATGCAGAATTGGCTTCAACAACTGCTTCTGTTTCTTCTGATCCTCTGTCACGCGAACAAGAGGATCATGATGATGATGACCCTTTAAACCCAAAACATGTTAAACGGCCCTCCGTGGTGACTTTTCGTCATCCTGAGACAAATGAGATAGTGGAGGATGAAGAGATTGTTGAACCTGCAAGTGGAGAAAGTAGTAGTAACAATAGTAAACGTGTGAGGCCGCATGCCGAGAGAGTTGGGAAGAAGGGTTCGTGCTATCGATGTCTTAAAGGGAGTCGTCTAACTGAGAGGGAGGTTTGCATTGTTTGCAGTGCAAAGTTTTGTCGCAACTGTGTGCTTAGAGTAATGGGGTCCATGCCTGAAGGCAGAAAATGTGTCACTTGCATTGGTCATAGAATTGATGAGAACAAGCGAGGGAGGCTTGGAAAACCTTCTCGGATGCTCAAGTACTTGTTGTCTAAGGGGGAAGTGAAACAGATCATGAAGGATGAGATGTTTTGTGAAACAAATCAAATACCAGCAGAAGATGTTATTGTGAATGGAGAACCTCTTGACTGGGATCAGCTCACGCTGCTTTTGACCTGTTCAAACCCCCCAAAAGGATTGAAACCGGGTTTCTATTGGTATGATAAAGCATCTGGCTTTTGGGGAAAGGAAGGTCAACGACCATGTCAAATTATTAGCCCACAGTTGGAAGTTGGGGGGCACTTGCAGAGAAATGCAAGCAATGGAAAGACAGAAGTAACTATAAATGGTCGAGAGATTACCAAAGAAGAGCTATGGATACTGAAGTGGGCAAGAGTGCCATGTGATGGAACAACTGACTTTTGGGTGAGCCATGATGGATCATACATGGAAGTGGGACAGAAGAATGTGAAGGGGCATATATGGGAGAAGTCTACAGTGAAGTTTGCTTCTCTAATTCTATCGCTACCAGTTCCTTCTAGCTCCTTAACACCTGCTGGCGAAGGAGAAAGTGGAATTAGCAAACACAACATTGAGCAGAAAATGCTTCACAAATATTTACTTGTCGGTTCTGACAATTCTGGAACATGTACGATATATAAACAGACTGAACCATTTATATTGCAGGCCAGGCTTCTGTATAATGTTCCATTCTCTGGAACCGAGCTTCACAACATAAAGCTGGTAATTCAAAGAAACTTGTATAGGTACCTTGGTATCATACTAGAGGCGCGAGAAATTTTTGAAGAGAGTTTGTATAAAAAAAGTAACGAACAACATGTTGGTGAATCAACTTCTTCTGGGACTACTGGAGAAATTATTGACACGACAACCTATTCCATTAGTCCAAGACTAAGAGCTTTCTCCGATTGGCTACTCCAATACATGATGTCTGGCAACTTGGATGAAATATTTCCAGCAGCTGCTCGTGAATATGCCCCACTGGTGGAGGAACTGTGGAGGGATGCAGCCATTCAGGCCACGCACAACAGGAGAAATGAAATAAAAAATCTTCCAAAAACTGCTGGCTATTTTCTTGAGCGGGCTGTTGAAATTTCCAGGATAGATTATGAACCCTTGGACATGGACATCTTGTATGCTGAAGGGATGACCTTATCCAATGGCCTTTCTTCCATGGAATTTTCATTTCCTGTGTCAGCTCATGAGGACTCATTGGACCCTGTTTATCGACATGATCCTTTGCTCAGGTATCAGCTCATCAGAGTACATCCAAAAGGCCTTGGAGAAAAGTGCAAGTTGTTGGACATGTTTGAAGACACTGATGTAGTGTTGTTCTCAGTAGCCTTAACTGACTATGATGAGTACACGGTAGACAGTAAAGGAGCTGTTACCAACAAAATTTTAGCAGCCAAACATATCTTTGAAAACATCATCACTCATAGAGTCTTCAGCAACACGAAATTTCTTCTCATATTGACCAAGTTTGATCTGTTTGAGGAAAAGATTGAACAGGTTCCTCTAACACAGTGTGAATGGTTTTTGGACTTCGATCCAGTTATTAGCCACAATCATAAAACCGCCAGTATTAGCAAACGCAGCAACCATCCTCCACTAGCTCAACGTGCTTTTCAATACATTGGTATGAAGTTCAAGAGCTGGTTCAATTCTCTAACTGGTCGAAAGCTGTTTGTTTCACTGGTTACTGGGTTGGAACCTTCTACTGTTGATGAAGCTCTTAGATATGCAAGAGAGGTTATGGTGTGGCAAAAATGGGACCCCTCTTTGAGAAATGAGAAGTCTGAGATAACATCCACAACTTTTGAGGCAAGCTCTGAAGAAAAATATAATAACTATAATCAACCCTAG 2520 0.427 MASLLKNLRPGVPSVHDAGGDFSYEYSFAEEYKGPPLGYSVPEVLPFNLDQVPFAPVAHSPPNNLSLPVIQPFRKTNAELASTTASVSSDPLSREQEDHDDDDPLNPKHVKRPSVVTFRHPETNEIVEDEEIVEPASGESSSNNSKRVRPHAERVGKKGSCYRCLKGSRLTEREVCIVCSAKFCRNCVLRVMGSMPEGRKCVTCIGHRIDENKRGRLGKPSRMLKYLLSKGEVKQIMKDEMFCETNQIPAEDVIVNGEPLDWDQLTLLLTCSNPPKGLKPGFYWYDKASGFWGKEGQRPCQIISPQLEVGGHLQRNASNGKTEVTINGREITKEELWILKWARVPCDGTTDFWVSHDGSYMEVGQKNVKGHIWEKSTVKFASLILSLPVPSSSLTPAGEGESGISKHNIEQKMLHKYLLVGSDNSGTCTIYKQTEPFILQARLLYNVPFSGTELHNIKLVIQRNLYRYLGIILEAREIFEESLYKKSNEQHVGESTSSGTTGEIIDTTTYSISPRLRAFSDWLLQYMMSGNLDEIFPAAAREYAPLVEELWRDAAIQATHNRRNEIKNLPKTAGYFLERAVEISRIDYEPLDMDILYAEGMTLSNGLSSMEFSFPVSAHEDSLDPVYRHDPLLRYQLIRVHPKGLGEKCKLLDMFEDTDVVLFSVALTDYDEYTVDSKGAVTNKILAAKHIFENIITHRVFSNTKFLLILTKFDLFEEKIEQVPLTQCEWFLDFDPVISHNHKTASISKRSNHPPLAQRAFQYIGMKFKSWFNSLTGRKLFVSLVTGLEPSTVDEALRYAREVMVWQKWDPSLRNEKSEITSTTFEASSEEKYNNYNQP 839
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu5g02282 839 MobiDBLite consensus disorder prediction 80 152 - -
Vimu5g02282 839 FunFam Extra-large guanine nucleotide-binding protein 2 456 601 - -
Vimu5g02282 839 Pfam G-protein alpha subunit 407 803 IPR001019 GO:0003924|GO:0007186|GO:0019001|GO:0031683
Vimu5g02282 839 ProSiteProfiles G-alpha domain profile. 413 819 IPR001019 GO:0003924|GO:0007186|GO:0019001|GO:0031683
Vimu5g02282 839 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 652 808 IPR027417 -
Vimu5g02282 839 SMART galpha_1 401 766 IPR001019 GO:0003924|GO:0007186|GO:0019001|GO:0031683
Vimu5g02282 839 MobiDBLite consensus disorder prediction 92 126 - -
Vimu5g02282 839 FunFam Guanine nucleotide-binding protein subunit alpha 633 750 - -
Vimu5g02282 839 SUPERFAMILY Transducin (alpha subunit), insertion domain 449 598 IPR011025 GO:0007165
Vimu5g02282 839 PANTHER GTP-BINDING PROTEIN ALPHA SUBUNIT 192 808 IPR001019 GO:0003924|GO:0007186|GO:0019001|GO:0031683
Vimu5g02282 839 Gene3D - 451 599 IPR011025 GO:0007165
Vimu5g02282 839 Gene3D - 637 805 IPR027417 -
Vimu5g02282 839 MobiDBLite consensus disorder prediction 820 839 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu5g02282 Vimu-Chr5 33865365 33868983 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu5g02282 - - gmx:100791124 1363.98