Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu5g02279 AGGCAAGAATCTCCTCTTCTGTTTTGCTCCCTCTGTTGGCGTTGGGTTTGTTGGTCGAGAGAGAAGAAAAACCCTGAAAGGCGAAAGTCCAGAAAGAGCAAAACGATGTCGTACGACGAGGTGGAGATCGAGGACATGGAGTGGAACGAGGAGTTGCAGGCCTACACGTACCCGTGCCCTTGCGGGGACCTCTTCCAGATCACGAAGGAAGACCTCAAACTCGGTGAAGAGATTGCTCGGTGCCCTAGCTGCTCTCTCTATATCACCGTCGTCTACAACATCGAAGATTTTCTCGCCGATTCCGACCAAAATCGACGGAACAAGGGTCTCCAACCTTCCAAACAACAAACCGTAACCGTTGCTTGA 366 0.5137 RQESPLLFCSLCWRWVCWSREKKNPERRKSRKSKTMSYDEVEIEDMEWNEELQAYTYPCPCGDLFQITKEDLKLGEEIARCPSCSLYITVVYNIEDFLADSDQNRRNKGLQPSKQQTVTVA 121
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu5g02279 121 Gene3D DPH Zinc finger 34 119 IPR036671 -
Vimu5g02279 121 FunFam Diphthamide biosynthesis 3 34 115 - -
Vimu5g02279 121 PANTHER DPH3 HOMOLOG-RELATED 37 111 IPR044248 GO:0017183|GO:0046872
Vimu5g02279 121 ProSiteProfiles DPH-type metal-binding (MB) domain profile. 37 93 IPR007872 -
Vimu5g02279 121 Pfam CSL zinc finger 39 93 IPR007872 -
Vimu5g02279 121 SUPERFAMILY CSL zinc finger 37 107 IPR036671 -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu5g02279 K15455 - gmx:100500529 172.17