Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu5g02273 ATGAACATGAACATGAACATGAACATGAACATGACAATGGCTTCCAAGTCCAATTCCACAATATTTGGAGTTCCTTCTTTCACAACATGCCCTTTCTCTACGACTGGAACTAGAACCTGCTGCATTCATGTTCTTGCCATTCCAAATGAAAAAACCAGAGACACTGTTTCTCTCGGTCTCAGTCTGATCAAGAGGAGGAGTCCCATTGAAACAACTCTCGGATATCTCAATGCACCAATTTCAGCCCTTAATTCAGGTTTAGAAGCATCAATTACAGATTCCAACGAACTTTCAGCCGTGTTAACAAATGCCAAAATAGTACTGGATTCTGAAGATGAAAATAAGATACAACTGAGAGTGGACTTGACTGGTGATCAAACACAAAAAGTATTCGATAGGATCGTAACAAACTTAGGTCGTACTGCCCCACCGGTTCCGGGATTTCGCATGCAAAAAGGAGGTAAGAACCAAGAAGCTGCATTATTGATAAAGATTGATACAATACCAAAGGACTTCCTTCTTCAGATGCTAGGGGAAGAACGGGTTATCAAATTCGCAATACAAGAAATACTCAACTCTACCATGGCTGATTATGTGAAAAAGGCAAGTGATTTTTACCAAATAATATATGTGGGTGTCATGAACATGAACTTATTTTCACATTTGATGATCCAATACCAGGAAAATATGGATGAAAAGAACTGGAAGATAAACACTACCCAATCGGCAGAACAACTCAAGAAGTCATTCACTCCAGGGAATGACTTTGGCTTCAATGTTATACTTGAGCCTGAAAATTAG 801 0.392 MNMNMNMNMNMTMASKSNSTIFGVPSFTTCPFSTTGTRTCCIHVLAIPNEKTRDTVSLGLSLIKRRSPIETTLGYLNAPISALNSGLEASITDSNELSAVLTNAKIVLDSEDENKIQLRVDLTGDQTQKVFDRIVTNLGRTAPPVPGFRMQKGGKNQEAALLIKIDTIPKDFLLQMLGEERVIKFAIQEILNSTMADYVKKASDFYQIIYVGVMNMNLFSHLMIQYQENMDEKNWKINTTQSAEQLKKSFTPGNDFGFNVILEPEN 266
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu5g02273 266 Pfam Bacterial trigger factor protein (TF) 108 203 IPR008881 GO:0006457|GO:0015031
Vimu5g02273 266 SUPERFAMILY Trigger factor ribosome-binding domain 108 203 IPR036611 GO:0006457|GO:0015031
Vimu5g02273 266 PANTHER TRIGGER FACTOR CHAPERONE AND PEPTIDYL-PROLYL CIS/TRANS ISOMERASE 9 264 IPR005215 GO:0015031
Vimu5g02273 266 Gene3D - 106 212 IPR036611 GO:0006457|GO:0015031
Vimu5g02273 266 FunFam Trigger factor 104 208 - -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu5g02273 - - vum:124823143 387.497