Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu5g02260 ATGGCTAACCCTTCTGGGAATCACGAAGAAGAGCAGACAACCCATGTTGCGTCGTCGTTCAACGGGAATTTGGCAGCCGACACTTCGCCCACCGCGCTCGCCATGAAGCACAACTCTGGCATCGCCCTCGATTGGACCCCTCAAGAACAAACCATTCTCGAAGAAGGACTCTCTCTGTTTGCTTCTGAACCTAATCTCACTCGCTATGCAAAGATAGCAATAAATCTAAATAACAAGACAGTCCGAGATGTAGCACTGAGGGTCAGGTGGATGAATAAAAAGGAAAATTGCAAGAGAAGGAAGGATGAATTTTCAAGGAAAAGTAAAGATAGAAAGGAAAAGGTTTCAGATCCTGCAGTGAGATCATCTCACTTTACTGCTCAATCTAATGTTTCCCCATATTCTCCTGCAATGAAGATGATGGAAAATGATGACAGCATCTGTCATAAAGCTATTGGAGGCCCTGCAGGAGAGCTCTTAGAGCAAAATGCACAAGCCTTGAATAACATCTCTACCAATCTTGCTGCTCTTCAGTTTCAGGAGAACATCAATCTTTTCAGCCAAACGAGAGACAACATCATCAAAATTTTGAATGACATGAATGACATGTCAGAAGCAATGAAGCAAATGCCACCTCTACCTTTTAAGATCAATGAAACGATATTCAGCTCCATAATTCCAAACACCATTCACCAGATGCTATAA 705 0.427 MANPSGNHEEEQTTHVASSFNGNLAADTSPTALAMKHNSGIALDWTPQEQTILEEGLSLFASEPNLTRYAKIAINLNNKTVRDVALRVRWMNKKENCKRRKDEFSRKSKDRKEKVSDPAVRSSHFTAQSNVSPYSPAMKMMENDDSICHKAIGGPAGELLEQNAQALNNISTNLAALQFQENINLFSQTRDNIIKILNDMNDMSEAMKQMPPLPFKINETIFSSIIPNTIHQML 234
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu5g02260 234 CDD SANT 45 94 IPR001005 -
Vimu5g02260 234 Gene3D - 45 117 - -
Vimu5g02260 234 PANTHER FINGER CCCH DOMAIN PROTEIN, PUTATIVE (DUF3755)-RELATED 19 227 - -
Vimu5g02260 234 Pfam Protein of unknown function (DUF3755) 177 209 IPR022228 -
Vimu5g02260 234 MobiDBLite consensus disorder prediction 97 119 - -
Vimu5g02260 234 MobiDBLite consensus disorder prediction 97 124 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu5g02260 Vimu-Chr5 33741716 33749202 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu5g02260 - - gmx:100775443 399.053