Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu5g02253 ATGACGGTGGACGATCGGTTCGCACATTTGAACCCTAAGACGTGCGTGGTTGTAGGTGGCAGAGGATTCCTCGGAAGATCATTGGTCCTCAGGTTGTTGAAACTCGGTAACTGGATCGTCCGAATCGCCGATTCCGCTCACTCTCTCCAGCTCCATCACTCCGAGTCCACCCTCGCCCAAGCTCTCTCTTCCGCACGCGCTTCTTACTTCCACATCGACCTTACCGATAAATGCAACATTGTCAAAGTTCTGGGAGGTTCTTCTGTTGTGTTTTTTATGGATGTTGCTGGCGTTGATGTTAATGACTTCTATACTTGTTACAGGCTAATAGTTCAAGGAGCCAAAAATGTAATTAGTGCTTGCCGAGAATGTAGAGTGAAACGCCTAATATATAACAGTTCCGCGGATGTTGTATTTGATGGTTTGCATGATATTCGTGATGGAGATGAGTCGTTAGCCTATCCGTGGAAAACTGACAATATGTTGAGTGACCTTAAGGCTCAAGCGGAATCTTTGATCCTGAGTGTCAATGACATTGATGGTCTATTGACGTGCTCTCTTCGCCCTAGTAATGTTTTTGGACCTGGTGACACAGAATTTGTACCATATTTTCTCAAGTCAGCAAGATATGGTTTTGCAAAGTTTATTATAGGGACTGGTGATAATCTTTCAGATTTCACCTTTTCTGAAAATGTTACCCATGCCCACATCTGTGCCGAAGAAGCCCTAAATTTCCAAACAGTTTCTGTTGCAGGAAAGGCATTTTTCATCACGAATAATGAGCCAATAGAATTCTGGGAATTTCTTTCGCTTTTGTTAGAAGGTCTTGGATATCGAAGGTTTTCTTTACCTTATGAAGATCTTCCTGTCAAAGATGTTGACAAAATTGATAGGCATAGGTATGGAATTGTTGATATGAGTTCTAGAACTTTGTTGCAATATGAATCAGAAATTGATGGAATGGTTGATGTTCTTTTCACCAGTTTGAAAGAGTTCATGATATATTTGATGAGAATTTCTCCTGTTTTTAAATCGAGGCTTCTGCGTTATCATGACAACTTTCAGCGGTATGAAAAGAATGGTTAA 1086 0.4116 MTVDDRFAHLNPKTCVVVGGRGFLGRSLVLRLLKLGNWIVRIADSAHSLQLHHSESTLAQALSSARASYFHIDLTDKCNIVKVLGGSSVVFFMDVAGVDVNDFYTCYRLIVQGAKNVISACRECRVKRLIYNSSADVVFDGLHDIRDGDESLAYPWKTDNMLSDLKAQAESLILSVNDIDGLLTCSLRPSNVFGPGDTEFVPYFLKSARYGFAKFIIGTGDNLSDFTFSENVTHAHICAEEALNFQTVSVAGKAFFITNNEPIEFWEFLSLLLEGLGYRRFSLPYEDLPVKDVDKIDRHRYGIVDMSSRTLLQYESEIDGMVDVLFTSLKEFMIYLMRISPVFKSRLLRYHDNFQRYEKNG 361
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu5g02253 361 PANTHER BIFUNCTIONAL POLYMYXIN RESISTANCE PROTEIN ARNA 13 285 - -
Vimu5g02253 361 Gene3D - 5 316 - -
Vimu5g02253 361 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 9 292 IPR036291 -
Vimu5g02253 361 Pfam 3-beta hydroxysteroid dehydrogenase/isomerase family 16 281 IPR002225 GO:0003854|GO:0006694|GO:0016616
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu5g02253 Vimu-Chr5 33696887 33702110 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vimu5g02253 14 278 Lipid Metabolism Gene Families AT2G33630 30.742 7.88e-27 108
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu5g02253 K23558 - vum:124823132 533.872