Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu5g02237 CATTCCCTCCTCAAACGCCACCACAACAACAACCCTTCAGAAACTCCTCCCCCCACATCACTCTTCCTCAAACCCTCCACACCAACCTTAACTCTCTCCCACCATACTCTTTCTACTAACTCTCATATCACTTTCTTTTCCCTCTCCCAAACCACACCCTCTTCATCCTCCTCCACCTCCCAAACCAGCCCCTCCTTTGACCTCCTCCGCCACCACCTCTCCTCCCAAAACTTCCAGCTAGCTGATGAAGAGACCCGCCGTCTCCTCATCGTGCTTGCTGGAGAACCAGCTCAGAAGCGCGGCTACGTCTTCTTCTCTGAGGTGCAGTTCATATCCGGGAGCGACCTCTTGACCATTGACACCCTTTGGAGGGAGCACAGTGGCAACAAATTCGGGTACAGTGTGCAGAAAAAGATACTGGAGAAGGCCAATGGGGACTTCACCAAGTTCTTCATCAAAGTGGGGTGGATGAAGAAGCTTGATACTGAGGTGGAGCAGTACAACTACAGGTCTTTCCCTTCTGAGTTCGTCTGGGAGCTCAATGAGGACACCCCAGAGGGACACTTGCCTCTCACAAACGCTCTCAGAGGAACACAGTTACTCAATAATGTTCTCAACCACCCTGCTTTTGTTGATACTGACAAAGAACGTGATGGAAAAGATGATGCTGAGAACAAGGACAACGGGGCACTCGCAGGATCAAAGGATAATAGTTCATCTCCCAAGACATTGTCTCAGAGGGTCTTTAAACCGGATTATAGCTTCTGA 768 0.5013 HSLLKRHHNNNPSETPPPTSLFLKPSTPTLTLSHHTLSTNSHITFFSLSQTTPSSSSSTSQTSPSFDLLRHHLSSQNFQLADEETRRLLIVLAGEPAQKRGYVFFSEVQFISGSDLLTIDTLWREHSGNKFGYSVQKKILEKANGDFTKFFIKVGWMKKLDTEVEQYNYRSFPSEFVWELNEDTPEGHLPLTNALRGTQLLNNVLNHPAFVDTDKERDGKDDAENKDNGALAGSKDNSSSPKTLSQRVFKPDYSF 255
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu5g02237 255 CDD GUN4 69 201 IPR008629 -
Vimu5g02237 255 Gene3D - 128 215 - -
Vimu5g02237 255 Gene3D - 3 127 - -
Vimu5g02237 255 MobiDBLite consensus disorder prediction 211 229 - -
Vimu5g02237 255 MobiDBLite consensus disorder prediction 1 26 - -
Vimu5g02237 255 MobiDBLite consensus disorder prediction 231 255 - -
Vimu5g02237 255 MobiDBLite consensus disorder prediction 1 17 - -
Vimu5g02237 255 MobiDBLite consensus disorder prediction 211 255 - -
Vimu5g02237 255 Pfam GUN4-like 60 207 IPR008629 -
Vimu5g02237 255 PANTHER TETRAPYRROLE-BINDING PROTEIN, CHLOROPLASTIC 7 255 IPR008629 -
Vimu5g02237 255 FunFam Tetrapyrrole-binding protein, chloroplastic 128 215 - -
Vimu5g02237 255 SUPERFAMILY GUN4-like 60 210 IPR037215 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu5g02237 Vimu-Chr5 33597417 33598733 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu5g02237 - - pvu:PHAVU_011G054500g 397.897