Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu5g02233 ATGGTTCCATCTGATGTTTGTCCGACGGAGGATGCAGTTAAAACATTTATAGAGCACTTGGTAGACCCATTGCTGCCAGCAAAGTCTTCTGTTCAGGATTACCCATCACCATCTCAACAGAAGTTAGTAGCAAGACAGGTGCGATCGGTTGTCTTACTTTACAATTACTACCAAAGGAAACGACATCCACAACTTGAATATCTTCCATTAAATGAATTTTCCAAGTTGGTTGTGGTTTTGAGGCCAGCTTTATTAGCATATATGCAATTCATGCAAAATTCACATGAAGAAGAGCTCACTGACGTGGAGAAGCAGCTATCATTGACAGAAAAGATGATTATGGAAGCGTGTGATGTATCTAAATCTTTAGATGCATCAAAGAATGTTCCTAATATAGAGGGATGGCCCATTACAAAAGTAGCTATCCTTTTAATTGACAGTAAGAAGGAAAAATGCTTTTTGCTGTTTGGTTCCATTACCAGTGGGGTATGGTCTCTGGTAGAAAAAAGTTTGGACACCTCCAGCCAAAGTTCTCTGATTTCAAAAGGTCTGGACACCTCCAGCCAAAGTTCTCTGGGGTCGAGAGGTCTGGTTACCTCCAATCAAAGTTCTGAAGTTACACCAGGAACAAAACAATATAAAAAGAAAAGAGTTCTTAAAAAATCTTCAAAGGATGAATTAAAAGTCAACGAAGATGTGTTTCTGCAACTTGGCCATTCTGCTATAAAGGAAGCCACAGGTATCAATAATACTGATATTTTTCTTTTGGAGAGTGGCACTATCTATTCTGAGAGTAAAGAGAAGGAAGCTTCTCGGTTTTATATAATGCAGTGCTCCAAGACTATCAATGAAGAAGTTTTTGAAATTCTGATGACAGGGAAATGGATCTCTGTTGTGTCCGGCATTCAGGGACCTTTGGTCACTAAGAGTTCTGGAAGTTGGATGATCACTCCTGTAATGGACTACTTCCACGTGCTTCCATGCTATGAAATAATATCAAAGTGGATATCCAGGGTAACAGAGAAAAATATAAAGGTGGACACCCCTGAAGTAACAGAATTGTATGTAAATGAGGACATGTTTACTGCTCATGATAGTAAGCCAAACAATGATAATATTGATTCACCAAAGCAGAAAGAGAACACTGGAAGTTGCACACTAGCATTATCTGATTCTATATATGAGCCCATGGAAATGATCATGAATGAAAATTCGATTTCAAAATCAAAGATCAAAGAAAAGTGTCAGTATATTATTGACAATACTGTACAAGTAGATGAAGATGATCTTGAAAGAAATAATCCATCTGTGAAGTATAATTCTAACGGCTCTGCAAGTACTGTCAAGGCTTTAAATGTTGATTCAACAAATATGCTCGTTACTGAAGGTGGAACCAGCAATCTTGCTTCTTTGCACAATAATTATGCCAATAGGCCTGTAGATGGCCGTATTCAGATTGCAAATCATTCTGAGTCAGATCAAGAGGAGCTCAAAGTTCTTTCAGATTCGAAAAAGATATTGACTCAAACTGCCCTAGCTTCTTTGATACGAAGGAGGAATGAATTGCAGTGTCCTGCTTCCATAGCCATATCTACTATGCTGGTTTTACTTAAATTTAAGGATTACATTGCTACTGTTTTGATTGTTAAAAAATTCTATATTTGCATATATCTGAGATTTAGTTACTCCATTCAGGCCCTTCAGCAGCGCAAGATAGAGGACGAGATTGCTTGTCCTGCGTTTTTCTTCTCTGGTATTTTCAGTATGACCCCCTACCCCTGTGGTGATTCTCATGGTTTATCCTCTCCTAATTGTTATTTTTGTTACTGTTATATTTCTATCTATCAAACTCTAGAATTAAAGATTGAATCAATTATAGAAGGCTGCAATGGTACATGGCTCTCGAATCAAGAAAGGGTGTTTGGACAACAAATCCAACCTCTTAAGAGGAAAAAATTGTCAGAGGCTGTCTTTATCACACAAAGTTCATGCCAGGAACTAGATGATATATGTCGCACAAACAATTGGGTCCTGCCAACTTATCATCTATCTCAATCAGAGGGTGGATTCAAAGCCAATGTAACTGTTAAAGGAGTGGAGTTTCAGTGTTCATTCGAAGGTAAAATGGGTTCCAGTCCTTCTGAAGCAAGAGAATCAGCTGCAGTTCAGATGTTAACTAACTTGAGAAGTATAGCAAAATTAGAAGAGTGA 2211 0.3804 MVPSDVCPTEDAVKTFIEHLVDPLLPAKSSVQDYPSPSQQKLVARQVRSVVLLYNYYQRKRHPQLEYLPLNEFSKLVVVLRPALLAYMQFMQNSHEEELTDVEKQLSLTEKMIMEACDVSKSLDASKNVPNIEGWPITKVAILLIDSKKEKCFLLFGSITSGVWSLVEKSLDTSSQSSLISKGLDTSSQSSLGSRGLVTSNQSSEVTPGTKQYKKKRVLKKSSKDELKVNEDVFLQLGHSAIKEATGINNTDIFLLESGTIYSESKEKEASRFYIMQCSKTINEEVFEILMTGKWISVVSGIQGPLVTKSSGSWMITPVMDYFHVLPCYEIISKWISRVTEKNIKVDTPEVTELYVNEDMFTAHDSKPNNDNIDSPKQKENTGSCTLALSDSIYEPMEMIMNENSISKSKIKEKCQYIIDNTVQVDEDDLERNNPSVKYNSNGSASTVKALNVDSTNMLVTEGGTSNLASLHNNYANRPVDGRIQIANHSESDQEELKVLSDSKKILTQTALASLIRRRNELQCPASIAISTMLVLLKFKDYIATVLIVKKFYICIYLRFSYSIQALQQRKIEDEIACPAFFFSGIFSMTPYPCGDSHGLSSPNCYFCYCYISIYQTLELKIESIIEGCNGTWLSNQERVFGQQIQPLKRKKLSEAVFITQSSCQELDDICRTNNWVLPTYHLSQSEGGFKANVTVKGVEFQCSFEGKMGSSPSEARESAAVQMLTNLRSIAKLEE 736
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu5g02233 736 Gene3D - 664 730 - -
Vimu5g02233 736 Pfam double strand RNA binding domain from DEAD END PROTEIN 1 662 728 - -
Vimu5g02233 736 SUPERFAMILY dsRNA-binding domain-like 664 728 - -
Vimu5g02233 736 Coils Coil 92 112 - -
Vimu5g02233 736 MobiDBLite consensus disorder prediction 179 215 - -
Vimu5g02233 736 MobiDBLite consensus disorder prediction 179 209 - -
Vimu5g02233 736 CDD DSRM_SF 669 725 - -
Vimu5g02233 736 PANTHER ALEURONE LAYER MORPHOGENESIS PROTEIN 2 522 - -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu5g02233 - - pvu:PHAVU_011G055000g 969.918