Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu5g02183 ATGAAGAGGCTACACAGTAGCATTGGCATCCGTGATTTACGACCGCAGCTTGTGCTAATCGCATTTTGTCTCTTCACCTCTGCGTTCGGCTCCAAGATCGGAGAAACTTGCGGGTCGGATAACAAATGCGATGCAGGACTCAGCTGCCAGACATGTCCCGCGAATGGAAATACCCGACCGAGATGTTCGCGGATACAACCTTTGAATCCCAGTTCTAAGGTGAAAGGACTACCGTTTAACCGGTATTCATGGCTCACAACTCATAATTCTTTTGCTCTGGCCGGAGCTAGATCGGCCACCGGTTCCGTCATTTTAGCACCGATGAACCAAGAAGACACCGTTGCTGAACAACTCAAAAACGGCGTGAGAGGATTCATGTTAGATATGTATGATTTCCTAAACGATGTTTGGTTATGTCACTCCGCCCAAGGCACATGTTACAACTTCACTGCATTTCAACCTGCCATAAACGTGCTTAAAGACATGCGATCATTTCTAGATGCAAATCCATCTGAAATTATCACCATCTTCATAGAGGACTACGTCAAATCCTCTCAGGGTTTAACAAACTTGTTCAAAGCTTCGGGACTAAGCAAGTACATGTTCCCAGTGTCTCGCATGCCTAAGAATGGCGGAGATTGGCCAACTGTTGATGATATGGTTCAGAAGAATCAGCGCCTAGTGGTCTTCACCTCCAAATCAGCCAAGGAAGCTTCCGAGGGCATCGCTTATCAGTGGACATACGTTGTAGAAAACCAATATGGAGATGAGGGGATGAAAGCTGGTTCTTGTCCAAGCCGTGCAGAATCTCCTGCAATGAACACAAAGTCTAGATCGTTAGTTTTGGTAAATTATTTTCATTCTGCTCCTAATCGAAGTCAAGCCTGTGCTGATAATTCGGCTCCACTGCTTAGCATGATGAAGACTTGTCATGATGCAGCTGACAGTCGTTGGCCAAATTTCATTGCTGTTGATTATTACCAGAGGAATGATGGCGGAGGAGCACCAGAAGCTGTTGATGAAGCAAACGGCCATCTCACTTGTGGCTGTGGCAACATTGCCTATTGCAAGGCAAACGCTACGTTTGGCACTTGTGATGTTCCTCCCATTTCTCCACCTCCACCTGCGTCAGAATCACCCTCCGACAACCAGCAGTCTCAAAATAATAATCATGCAAACAATGCTTATATTGGTAGAACAACCAAGTTGATGCAAACGGTTGTGGTGATTTTGGCGACGATAACTTTGTTGGCATGGTTATAG 1263 0.4584 MKRLHSSIGIRDLRPQLVLIAFCLFTSAFGSKIGETCGSDNKCDAGLSCQTCPANGNTRPRCSRIQPLNPSSKVKGLPFNRYSWLTTHNSFALAGARSATGSVILAPMNQEDTVAEQLKNGVRGFMLDMYDFLNDVWLCHSAQGTCYNFTAFQPAINVLKDMRSFLDANPSEIITIFIEDYVKSSQGLTNLFKASGLSKYMFPVSRMPKNGGDWPTVDDMVQKNQRLVVFTSKSAKEASEGIAYQWTYVVENQYGDEGMKAGSCPSRAESPAMNTKSRSLVLVNYFHSAPNRSQACADNSAPLLSMMKTCHDAADSRWPNFIAVDYYQRNDGGGAPEAVDEANGHLTCGCGNIAYCKANATFGTCDVPPISPPPPASESPSDNQQSQNNNHANNAYIGRTTKLMQTVVVILATITLLAWL 420
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu5g02183 420 Gene3D Phosphatidylinositol (PI) phosphodiesterase 67 343 IPR017946 GO:0006629|GO:0008081
Vimu5g02183 420 PANTHER UNCHARACTERIZED 41 357 - -
Vimu5g02183 420 SUPERFAMILY PLC-like phosphodiesterases 75 345 IPR017946 GO:0006629|GO:0008081
Vimu5g02183 420 CDD PI-PLCc_At5g67130_like 69 343 - -
Vimu5g02183 420 ProSiteProfiles Phosphatidylinositol-specific phospholipase X-box domain profile. 78 186 - -
Vimu5g02183 420 MobiDBLite consensus disorder prediction 369 392 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu5g02183 Vimu-Chr5 33152933 33157494 Dispersed/Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu5g02183 - - gmx:100798507 704.901