Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu5g02182 TGGGTACATTCAATAGCACGAGAAACTTCTCCGTTACGTCGGGTTGTTGAGTTTCAGCTTCAGCCATGGCGGCGGCTTAGTCTTATTCAGAATCCTAAACCCAACAATCATTCATTACTCCCTTTCACTTTACCAAGGCAAATGGCTTCGTCTCTCGCACTCCGATTCCGATCCCATCTCCTTCGCACCGCCTCACTCCTCCCCTCTTCCCTCCGCCGCCCTCCTTTCCAACCCTCGTCGCCACTCCTCTCCGCCCAACGCCTCCTCTCCACGGCGCGCCGCACGGCGCCACGCTCGCGGAAGTCGGTCGACATCGGCGCGCGCGCCCGGCAGCTCCAGACGCGGCGCCTCTGGGCCTACGCCCTGACTTTTAGCGGCCTCGCAGGGTTCGTGGTGATCGTGCTCAACAACTTTCAAGACCAGTTGGTGTTCTACGTCACTCCCACAGATGCGCTTGAAAAGTACGCGACCAATCCCTCCAAGGCGCGGTTCCGGTTGGGAGGCTTGGTTCTCGAAGGCAGCGTGGTTTACCCGAAGTCGAAGCCGGAGGTGGAGTTCGTCATCACCGATCTGATCACTGACATTGTGGTCCGGTACGAGGGTTCCTTGCCGGATTTGTTCAGGGAAGGGCATTCCGTGGTGGCGGAAGGGATCGTGAAACCGTTCACGGAGGAGATCAAGAAGGAGGTGTCGACAAATAACGTGTCCGAGAAGGCGAGGAGATTAGAGTGTTATTTTTCTGCCGTGGAGGTTCTCGCTAAGCACGATGAGAAGTATATGCCGAAAGAAGTTGCCGCTGCTATTGAGAAGAATAAGAAGATTATTGAAGAAGCTGCCGCAGTCAGCGTAGCGGCGGAGGTACCCAAGACCACCTAG 876 0.5639 WVHSIARETSPLRRVVEFQLQPWRRLSLIQNPKPNNHSLLPFTLPRQMASSLALRFRSHLLRTASLLPSSLRRPPFQPSSPLLSAQRLLSTARRTAPRSRKSVDIGARARQLQTRRLWAYALTFSGLAGFVVIVLNNFQDQLVFYVTPTDALEKYATNPSKARFRLGGLVLEGSVVYPKSKPEVEFVITDLITDIVVRYEGSLPDLFREGHSVVAEGIVKPFTEEIKKEVSTNNVSEKARRLECYFSAVEVLAKHDEKYMPKEVAAAIEKNKKIIEEAAAVSVAAEVPKTT 291
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu5g02182 291 Pfam CcmE 113 262 IPR004329 GO:0017003|GO:0017004|GO:0020037
Vimu5g02182 291 Gene3D - 138 268 IPR012340 -
Vimu5g02182 291 PANTHER CYTOCHROME C-TYPE BIOGENESIS PROTEIN CCME HOMOLOG, MITOCHONDRIAL 48 284 IPR004329 GO:0017003|GO:0017004|GO:0020037
Vimu5g02182 291 SUPERFAMILY Heme chaperone CcmE 138 267 IPR036127 GO:0005886|GO:0017003|GO:0017004
Vimu5g02182 291 Hamap Cytochrome c-type biogenesis protein CcmE [ccmE]. 110 272 IPR004329 GO:0017003|GO:0017004|GO:0020037
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu5g02182 - - gmx:100806496 389.808
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vimu5g02182 5 33150421 33152698 Vimu5g02182 5 33150421 33152698 ECH