Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu5g02181 ATGGATTCTCAAGTCTTGCTGGGTGTTGCACTTTCATCTGTCGGTGGTTTCAGCACTTCCATCGGTGCACTTTTCGTAATCCTTAGTAAAGCTCCAAGTTTGAAGGTGCTTGGACTGTTACAGGGTTTTGCTGCGGGTTTGATGCTGAGTATATCATTCTTTGATCTCACTCATAATGCCTTGAACTCACTTGGCTTCCTTAGAGGCAACCTTTGGTTCTTTGCTGGTGTCATATTCTTTGCTGTTGTTGCCAAATTTATACCAGAACCGACACCTTCTCCTCCCATTTCAAATGATAAGAGTACCAAGAAATCTGGGAATGAAGGAAACAAAGGCATTATGAAAAGGCGTCGCCGTCAAGTTTTACTCAGTGGTGTTATCACAGCCATAGGTATAAGTCTGCATAATTTTCCAGAAGGAATGGCAGTGTACCTTGGATCCATGAAGGGAGTTCGTGTTGGTCTTAACCTTGCCCTTGCCATTGCACTACACAACATTCCTGAGGGTGTTGCTGTTGCACTTCCCGTCTATTTTGCGACTGAAAGTAAATGGGAGGCATTCAAATTGGCATCACTTTCCGGGTTTGCTGAGCCACTGGGCGTTATAATTGTTGCCTGTTTATTCCCTACCAGCCTAAATCCTGAGATTCTTGAAGGTATTCTTGGATCAGTTGGTGGAGTTATGGCTTTTCTAACCCTTCACGAAATGATACCACTAGCTTTTGAGTATGCAGGACAAAAACAATCTGTTAAGGCCGTCTTTTGTGGGATGGCTTTCATGTCTGCAAGAGTATCATTATGGGCTGTCTTCTTGCTGCTGCAATCAGGAAGATGCCTTCAGAGACGAAACTCGAAAATTTCCAGTAACATTAATGTAGAGCAGTTGAACATGAAGCAGGTAGGAACCATTCATCTGTAA 918 0.4336 MDSQVLLGVALSSVGGFSTSIGALFVILSKAPSLKVLGLLQGFAAGLMLSISFFDLTHNALNSLGFLRGNLWFFAGVIFFAVVAKFIPEPTPSPPISNDKSTKKSGNEGNKGIMKRRRRQVLLSGVITAIGISLHNFPEGMAVYLGSMKGVRVGLNLALAIALHNIPEGVAVALPVYFATESKWEAFKLASLSGFAEPLGVIIVACLFPTSLNPEILEGILGSVGGVMAFLTLHEMIPLAFEYAGQKQSVKAVFCGMAFMSARVSLWAVFLLLQSGRCLQRRNSKISSNINVEQLNMKQVGTIHL 305
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu5g02181 305 Pfam ZIP Zinc transporter 115 261 IPR003689 GO:0016020|GO:0030001|GO:0046873|GO:0055085
Vimu5g02181 305 PANTHER ZINC/IRON TRANSPORTER 11 261 - -
Vimu5g02181 305 MobiDBLite consensus disorder prediction 93 112 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu5g02181 Vimu-Chr5 33146932 33149957 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu5g02181 K07238 - gmx:100793378 463.381
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vimu5g02181 5 33146932 33149957 Vimu5g02181 5 33146932 33149957 ECH